2IWG,2VOK,3ZO0


Conserved Protein Domain Family
SPRY_PRY_TRIM21

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cd12900: SPRY_PRY_TRIM21 
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PRY/SPRY domain in tripartite motif-binding protein 21 (TRIM21) also known as 52kD Ribonucleoprotein Autoantigen (Ro52)
This domain, consisting of the distinct N-terminal PRY subdomain followed by the SPRY subdomain, is found at the C-terminus of TRIM21, which is also known as Sjogren Syndrome Antigen A (SSA), SSA1, 52kD Ribonucleoprotein Autoantigen (Ro52, Ro/SSA, SS-A/Ro) or RING finger protein 81 (RNF81). TRIM21 domains are composed of RING/B-box/coiled-coil core and also known as RBCC proteins. As an E3 ligase, TRIM21 mediates target specificity in ubiquitination; it regulates type 1 interferon and proinflammatory cytokines via ubiquitination of interferon regulatory factors (IRFs). It is up-regulated at the site of autoimmune inflammation, such as cutaneous lupus lesions, indicating a central role in the tissue destructive inflammatory process. It interacts with auto-antigens in patients with Sjogren syndrome and systemic lupus erythematosus, a chronic systemic autoimmune disease characterized by the presence of autoantibodies against the protein component of the human intracellular ribonucleoprotein-RNA complexes and more specifically TRIM21, Ro60/TROVE2 and La/SSB proteins. It binds the Fc part of IgG molecules via its PRY-SPRY domain with unexpectedly high affinity.
Statistics
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PSSM-Id: 293957
Aligned: 5 rows
Threshold Bit Score: 356.886
Created: 29-Jun-2012
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2IWG_B         1 HMVHITLDPDTANPWLILSEDRRQVRLGDTQQsipgNEERFDsYPMVLGAQHFHSGKHYWEVDVTGkEAWDLGVCRDSVR 80  human
2VOK_A         7 HMVHITLDRNTANSWLIISKDRRQVRMGDTHQnvsdNKERFSnYPMVLGAQRFSSGKMYWEVDVTQkEAWDLGVCRDSVQ 86  house mouse
XP_007527611 288 FGVHVTLDPHTANRWLIVSKDRRQVRLGIFPQkvpeSQERFEeFPMVLGAQYFNSGKWYWEVDVTGkYAWDLGVCRDSVK 367 western Europea...
3ZO0_B         1 HMVHITLDRNTANSWLIISKDRRQVRMGDTHQnvsdNKERFSnYPMVLGAQRFSSGKMYWEVDVTQkEAWDLGVCRDSVQ 80  house mouse
XP_005323371 285 YGVYITLDQDTANPWLILSEDRRQVRLGNTRQdvpeNEERFDnYPIVLSAQSFNSGKHYWEVDVTGkEAWDLGVCRNSVR 364 thirteen-lined ...
2IWG_B        81 RKGHFlLSSKSGFWTIWLWnkqKYEAGTyPQTPLHlqvppcQVGIFLDYEAGMVSFYNITDhGSLIYSFSECaftgPLRP 160 human
2VOK_A        87 RKGQFsLSPENGFWTIWLWq-dSYEAGTsPQTTLHiqvppcQIGIFVDYEAGVVSFYNITDhGSLIYTFSECvfagPLRP 165 house mouse
XP_007527611 368 RRGSFtLSPKNGFWTIWLWn-gIYAVGTsPQKTLSllepprQVGIFLDIEARTVSFYSITKcSSLIYSFSGCaftdLVRP 446 western Europea...
3ZO0_B        81 RKGQFsLSPENGFWTIWLWq-kSYEAGTsPQTTLHiqvppcQIGIFVDYEAGVVSFYNITDhGSLIYTFSECvfagPLRP 159 house mouse
XP_005323371 365 RKGQFlVDTENGFWTIWLWn-kKYEAGTcPQTPLHlqvppcQVGIFLNYEDGIISFYNITDhGSLIYTFSECaftePLRP 443 thirteen-lined ...
2IWG_B       161 FFSPGFNdggkNTAPLTLCPL 181 human
2VOK_A       166 FFNVGFNysggNAAPLKLCPL 186 house mouse
XP_007527611 447 FFNAGFNdsgrNAAPLTLCPL 467 western European hedgehog
3ZO0_B       160 FFNVGFNysggNAAPLKLCPL 180 house mouse
XP_005323371 444 FFNPGFNngggNSGPLALCPL 464 thirteen-lined ground squirrel
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