2BA0,2Z0S,2CTJ,2DGR,4NBQ,4AM3


Conserved Protein Domain Family
KH_1

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pfam00013: KH_1 (this model, PSSM-Id:306517 is obsolete and has been replaced by 459630)
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KH domain
KH motifs bind RNA in vitro. Autoantibodies to Nova, a KH domain protein, cause paraneoplastic opsoclonus ataxia.
Statistics
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PSSM-Id: 306517
Aligned: 882 rows
Threshold Bit Score: 26.8601
Created: 11-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2BA0_C         137 GRIVaINPAR-VPRVIGKKGSMIKLLK-S-ElDVQ-IVVGQnG---------LIWVNGdRRK-VSIAEEAIYL 195 Archaeoglobus fulgidus
A0BMW1         107 INIIlLIPEGiVSFLIGSKGSQLAKII-EeT-NAK-ITVN--Qpian-ysprTVKIVG-DQStINCAIKAITK 172 Paramecium tetraurelia
Q23DM7         115 FTAIcLVPNGmVSLVIGIKGKQINQIM-NeS-NTK-VVAN--Qpink-mtsrTIRIDG-EYKkVAVAIKLIYQ 180 Tetrahymena thermoph...
A0CQB4         111 LEIImLIPEGtVSYVIGTQGKQIEHIK-LeT-KAH-LVIN--Qpiye-fklrTVTIIG-Kc--YFNIIGESSR 174 Paramecium tetraurelia
A0CWS9         111 FEMMmLIPEGtVSYLIGTSGKQIKNIQ-QeT-KTD-VVVN--Naink-fslrSVKIVG-QANcIFNAIKLITN 176 Paramecium tetraurelia
266_pfamImport   1 QTTT-EVPKAlAQRLL------QSNILrN-AySRHhVYVDRpHkmea--gktTIAVIAdEEE-AEYPWKLVRE 62 
101_pfamImport   1 TEVF-EVEADkVKFIIGRGGNKIREIQ-DrC-RVS-VQ-I--DkarnenganNVSVMG-DQLnIDRARDMINT 65 
Q16T16          57 RTSF-EVFTTkVPIIIGKGGVTIKRIR-TeS-RAQ-VE-I--DdntpgngrsTIHIEG-FTQdVSRARDAIFG 121 yellow fever mosquito
424_pfamImport   1 SEHQ-LIRNDyAGLIIGRNGERISGIQ-NeS-GAH-VQ-I--DrapdamnmrRIDVNG-PKSkVDRAMEMIKS 65 
236_pfamImport   1 SKHL-LVENDhVGAVIGQRGNNITKIR-NqC-DCQ-VRIAR-Qpqpg-tttrAIVISG-DPEeVDRAIEMVKN 66 
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