3MI9


Conserved Protein Domain Family
Tat

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pfam00539: Tat 
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Transactivating regulatory protein (Tat)
The retroviral Tat protein binds to the Tar RNA. This activates transcriptional initiation and elongation from the LTR promoter. Binding is mediated by an arginine rich region.
Statistics
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PSSM-Id: 306921
View PSSM: pfam00539
Aligned: 2 rows
Threshold Bit Score: 85.3122
Threshold Setting Gi: 297787734
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3MI9_C   2 EPVDPrlepwkhpgsqpktaCTN-CYCKKCCFHCQVCFITKALGISYGRKKRrqRRRAHQNSQT 64  HIV-1 M:B_HXB2R
P18098  45 RPLEP---------------CTNkCYCKRCSFHCQLCFSKKGLGISYERKGR--RRRTPRKTKT 91  Human immunodeficiency virus type 2 (...
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