1XHB,2D7I,2DRZ,3O5W,1GGP,3A07,1VCL,4D0Z


Conserved Protein Domain Family
Ricin_B_lectin

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pfam00652: Ricin_B_lectin (this model, PSSM-Id:306998 is obsolete and has been replaced by 395527)
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Ricin-type beta-trefoil lectin domain
Statistics
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PSSM-Id: 306998
Aligned: 85 rows
Threshold Bit Score: 60.2354
Created: 25-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1XHB_A 343 SLGEIRNV--ETNQCLDNMARKE----NEKVGIFNCHGM-GGnQVFSYTANKEIRT----DDLCLDV-----SKLNGPVT 406 house mouse
O86669 331 RTTYFTGG--EPAQCLSAAAGPPg---LGEVSIRSCDGSaS--QKWDVDQDGTIRPrn-dRDYCLTA-------LARKAG 395 Streptomyces coelicolor
Q9SLV9 165 LNSMVANIewLNNLCLQSTDDSS------HVGLNGCNTD-NKyQRWALYADGTIRQhv-nKNYCLTSd----QDFGRFVV 232 cucumber
Q9SLV9  37 GATHLVGR---DGLCLEMSPWYKpagiNFPTRLSPCDEKkQT-QLWTIVGDGTIRPm--nDKFCLAAev--fYGVINKAV 108 cucumber
O04071 314 VTRRISGR---DGLCVDVRDGLAk--dGNPVQLLSCGQQsS--QQWTFRTDGTIRS----LGKCLTNs---gDSSGNYAM 379 European elder
Q8LKQ3  10 PTVRFVGR---NGLCLDVPEGDYh--dGSRIQLWPCKSNsDQnQLWTIRRDGTIRS----NGRCLTTy---gYTAGSYIM 77  Viscum coloratum
1GGP_B   4 ATVRIAGR---DGFCADVNGEGQn---GAAIILKKCAENdN--QLWTLKREATIRS----NGGCLTTa----AAEQAKAG 67  Trichosanthes kirilowii
Q7Y0V1   9 STVRIGGR---DGMCLDVSNNVYn--nGNPIIMWKCKDQlEEnQLWTLKRDKTIRS----KGKCLTTh---gYAPGDYVM 76  Abrus pulchellus subs...
Q82HL7 420 SFAQVVNA--DSGLCLDIRDGVMd--lGTDVVTAPCTSSrT--QRWRVDTARGVLQssedPDFCLDSr----GSTDRGVG 489 Streptomyces avermitilis
Q825H7 404 RQTRLRNL--AADLCLDVRGEAKa---GAGTKLAVCSSAwT--QQWTYEKDGLLRSva-dPELCLDSgavdgVAELGRCV 475 Streptomyces avermitilis
1XHB_A 407 MLKCHh--LKG-NQLWEYDPVKLTLQHVN--SNQCLDKATEed---sqVPSIRDC-TGSRSQQW 461 house mouse
O86669 396 LTRCEp--GRP-NQQWH--------RNPW--QGTAWPRNAWqisgsvnRCLYQD--DRRLPARW 444 Streptomyces coelicolor
Q9SLV9 233 VSKCE---DKP-QQRWSLDAKDYTIDHPN--TDMVLDVFSVpds-tfpSVLVTNRrDGSASQRW 289 cucumber
Q9SLV9 109 VSECGk--VSDpNKKWTQKNDGT-IALVD--SRMVLTGDLD-------YVTLQ-SnKYTPSQSW 159 cucumber
O04071 380 IYNCDt--AIRdATKWVLSIDGT-ITHRL--SGLVLTAPQAaq---gtTLLLQ-KnIHAASQGW 434 European elder
Q8LKQ3  78 IYDCNr--GGWdLTTWQIRGNGI-ILNPR--SMMVIGTPSGsrgtrgtTFTLQ-TlGYSLGQGW 135 Viscum coloratum
1GGP_B  68 IYDCTq--ATAeLSAWEIADNGT-IINPA--SSLVLSSGAAns---llDLGVQ-TnSYASAQGW 122 Trichosanthes kirilowii
Q7Y0V1  77 IYNCTs--PVPeATYWEIWDNGT-IINPK--SSLALSAESStm---ggTLTVQ-MnEYRMRQGW 131 Abrus pulchellus subsp. tenuiflorus
Q82HL7 490 IWECGavyGRN-GRNLRFTVDAQGVIRPAvaPDHAVTPYGD-------ALFLVPa-EGRAAQRW 544 Streptomyces avermitilis
Q825H7 476 AESSA---HGG-DVRYDLTVQGE-VLSRR--KG-SLAVTPGntd-pdaDIVVK-VrDGSDKQRW 529 Streptomyces avermitilis
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