4YJ0


Conserved Protein Domain Family
DM
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pfam00751: DM (this model, PSSM-Id:307066 is obsolete and has been replaced by 459924)
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DM DNA binding domain
The DM domain is named after dsx and mab-3. dsx contains a single amino-terminal DM domain, whereas mab-3 contains two amino-terminal domains. The DM domain has a pattern of conserved zinc chelating residues C2H2C4. The dsx DM domain has been shown to dimerize and bind palindromic DNA.
Links
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Statistics
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PSSM-Id: 307066
Aligned: 70 rows
Threshold Bit Score: 55.7077
Created: 13-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
4YJ0_A          6 RLPKCARCRNHGYA-SPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQ 52   human
XP_015793796    9 KSPTCSRCRFHGERdVRVLQHK--CPYKDCSCSDCLLVRKRPPIYRAQ 54   two-spotted spider mite
XP_003116153   50 vKRHCGMCKQHGVI-VETRGH--TCEYKNCSCEHCELVRKRREIMSTQ 94   Caenorhabditis remanei
XP_008188194   79 KQRLCTNCKNHGLR-KVWKKHKRYCKYRDCPCLKCMKTAATRKNCAEQ 125  pea aphid
KKA68808       32 tRYTCSKCRDHGYV-AIKKYHS-LCPFAACQCKLCDLNEERKRVESEL 77   Pristionchus pacificus
XP_012798392  112 asyMCRKCKTHGHN-IPVKRHKRTCPYTNCKCIKCHLVDQGRKVVAKQ 158  Schistosoma haematobium
XP_012795838  455 SPYKCRKCKGHGMS-EPVRQHKRNCPYRDCTCDMCYLVEKGRRIVAQQ 501  Schistosoma haematobium
EUB57233       74 SSYMCRKCRAHGRL-IAVRQHKRNCPYKHCSCSVCSLVNYGRHIVARQ 120  Echinococcus granulosus
XP_009169560  373 ssyMCRKCRAHGKL-LPVKQHKRNCPFRSCSCAVCSLVNRGRQIVAKQ 419  Opisthorchis viverrini
CDS33635      196 ASYMCRKCKAHGQA-VPVKRHKRACPYLQCRCLKCRLVDQGRKVVARQ 242  Hymenolepis microstoma
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