4BJ8,2Y32,3EW1,3SZJ,1RAV,2OF9


Conserved Protein Domain Family
Avidin

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pfam01382: Avidin 
Click on image for an interactive view with Cn3D
Avidin family
Statistics
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PSSM-Id: 307508
View PSSM: pfam01382
Aligned: 36 rows
Threshold Bit Score: 90.0805
Threshold Setting Gi: 218766736
Created: 15-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4BJ8_E         7 NVTGVWRNELGSTLRVKAEG---SEVRGVYQTAVESTrgaaghHRSARIIGMvs--------dGTQPTVSFSVLWEK--- 72  zebrafish
2Y32_B         2 SVNWTWTNQYGSTLAITSFNsntGAITGTYTNNAANScd---egKPQGVTGWla-------ygNTGTAISFSVNFLGc-- 69  Bradyrhizobium ...
Q218I6        28 QVSWTWTNQYGSVLAITTYNqsnGAITGTYTNKAAGScd---dgKPQAAAGWla-------agNTGSAISFSVNFAGc-- 95  Rhodopseudomona...
3EW1_C        14 SASSSWQNQSGSTMII-QVDs-fGNVSGQYVNRAQGTgc---qnSPYPLTGR-----------VNGTFIAFSVGWNNste 77  Rhizobium etli ...
3SZJ_B         8 tAMSAWVNQDGSTLYINSINa-qGELTGSYINRAAGFac---qnSPYPVNGW-----------VFGTAISFSTKWLNsve 72  Shewanella deni...
Q63V51        45 NPIGSWLNELGSTMTIASISg-tGAITGTYVSPSGTTg------QTFSLSGWfyaappannglDQVTLVTFSVNWNNtaa 117 Burkholderia ps...
XP_790505     69 NVTGAWYNSLGSELIINVDRe-tGHVVGEFRTAVERQpga-agSGPGRVSGWts-------kdGTHKAIAFSVLWSNg-- 137 purple sea urchin
XP_011666509  19 SVEGAWTNELGSTVSFVVDKd-tGLMTGTYTTAVGDAp-----pTPFPLTGWts-------pdGSHPSVSFSVLWNGg-- 83  purple sea urchin
WP_012732748  33 NLVGSWGNQLGSTMKIQSVDpvtGAITGTYRSPSGTSg------QFFPLVGWtntap-aqsgqDNVTLVSFTVNWGSy-- 103 Burkholderia gl...
CBA15444      32 NPLGRWKNELGSTLIVSEFDassGKISGNYISPSGTTg------SEYPMVGWinnas--ptksNNRTVFTFSVRWGTy-- 101 Xanthomonas alb...
4BJ8_E        73 --GSCSAWVGQCFILd-DGAQVLKTFWMLRSVADNlASAWGST--RMGEDIFF 120 zebrafish
2Y32_B        70 --GSTTVWTGQL-----NNATGFQGLWYLSLAEAV---AWNGI--SAGADTFT 110 Bradyrhizobium japonicum
Q218I6        96 --SSTTVWTGQL-----NSNAGFQGLWLLSLAEPV---AWNGI--SAGADTFT 136 Rhodopseudomonas palustris BisB18
3EW1_C        78 ncNSATGWTGYAQVN--GNNTEIVTSWNLAYEGGS-----GPAi-EQGQDTFQ 122 Rhizobium etli CFN 42
3SZJ_B        73 scNSITSWSGFYINT--GGQGKISTLWQLVVNGSS-----SPSqiLKGQDVFS 118 Shewanella denitrificans OS217
Q63V51       118 ryNSITTWSGLCQIT--NNVPTITALYYYSNAFAQ--YSWKHV--NVGQDIFH 164 Burkholderia pseudomallei
XP_790505    138 --ASATAWTGLCHVC--QGQEIMKTTWILTSEVDTcDDHWSSN--RIGQDDFT 184 purple sea urchin
XP_011666509  84 --TSTTSWAGLLLTC--DGRETMKTTWLLVSETDc-DNSWGDT--QVGCDDFT 129 purple sea urchin
WP_012732748 104 --GTITSWSGLCRTQ--NQVPTIAALWYFAQSNAQ--FTWSHV--QTGQDVFS 148 Burkholderia glumae
CBA15444     102 --GSVTAWTGTCVDGtkYKPALITTLWHLAR--GSsDYSWDHV--LTNTDGFa 148 Xanthomonas albilineans GPE PC73
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