2XAF


Conserved Protein Domain Family
ELM2
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pfam01448: ELM2 (this model, PSSM-Id:307553 is obsolete and has been replaced by 460214)
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ELM2 domain
The ELM2 (Egl-27 and MTA1 homology 2) domain is a small domain of unknown function. It is found in the MTA1 protein that is part of the NuRD complex. The domain is usually found to the N terminus of a myb-like DNA binding domain pfam00249. ELM2 is also found associated with an ARID DNA binding domain pfam01388 in ARID1. This suggests that ELM2 may also be involved in DNA binding, or perhaps is a protein-protein interaction domain.
Links
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Statistics
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PSSM-Id: 307553
Aligned: 198 rows
Threshold Bit Score: 34.854
Created: 14-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
2XAF_B        102 MRVGPQYQAVVPdfdpaklarrsqerdnlgmlvwsPnq--nLSEAK---LDEYIAIAKE 155  human
XP_015706046  657 INVGSRFQAEIPtlqdrsrlgs----teqaalvwkPwgdiaTNEETqdrVMELLNMACS 711  Japanese quail
XP_008119723 1032 INIGSRFQAELPelqdrssven---yehpaslmwkPwgdiaTNEETqnkVTDLLKLACS 1087 green anole
XP_012892898   56 INIGSRFQAEIPelqerslagv---dkhvaalvwkPwgdvmTNPETqdrVTELCNVACS 111  Ord's kangaroo rat
XP_014718511 1057 INIGSRFQAEIPelqersragi---dehvaslvwkPwgdvmTNPETqdrVTELCNVACS 1112 ass
XP_003765214 1073 INIGSRFQAEIPkpreislaeg---dqhgaslvwkPwgdvmTNPDTqerVTELCNVACS 1128 Tasmanian devil
XP_008102239  736 INVGPRFQAEIPplrdqslaas---dtakeelvwqPweeleTNPSVlenVENLVTAACS 791  green anole
XP_015487286  735 INVGTRFQAEIPslqdrslaea---dehkaelvwqPwgdleTNKVTqenVENLLAAACS 790  Great Tit
XP_007472916  714 INVGTRFQAEIPpirdralaav---dehkadlvwqPwgnldASRETqgqVEDLLTAACS 769  gray short-tailed opossum
XP_006004810  769 INVGSRFQAEIPelrdkslaes---dkhgadlvwrPcaeleTKQGTqekVEEFLNMACS 824  coelacanth
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