1I7L


Conserved Protein Domain Family
Synapsin

?
pfam02078: Synapsin (this model, PSSM-Id:307960 is obsolete and has been replaced by 460438)
Click on image for an interactive view with Cn3D
Synapsin, N-terminal domain
This family is structurally related to the PreATP-grasp domain.
Statistics
?
PSSM-Id: 307960
Aligned: 33 rows
Threshold Bit Score: 130.801
Created: 14-Jul-2016
Updated: 4-Aug-2016
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1I7L_A         4 VLLVVDEPHTDWAKCFRGKKILGDyDIKVEQAEFSELNLVAHADGTYAVDMQ-VLRNGTKVVRSFRPDFVLIRQHAFGMA 82  Norway rat
XP_002428658 101 TLLVIDDQNTDWSKYFRGKRIQGDyDIRVEQAEFKDLNLASNSDTGTVVSMA-VFRNGTRIVRSFRPDFLLIRQNLRD-- 177 human body louse
XP_014274546 209 TLLVIDDQNTDWSKYFRVRRIHGDyDIRVEQAEFRELSLIANSEQGTLINMT-VIRNGTRVARTFRPDFVLVRQNLRD-- 285 brown marmorate...
EHJ70300     249 TLLVVDDQNTDWSKYFRGRRLPGEwDIRVEQAEFRELSVTASSD-GANVSMA-VYRSGTKVTRCFKPEFVLVRQNVRD-- 324 monarch butterfly
KXZ75661     152 TLLVVDDQNTDWSKYFRGKRI-GDyDIRVEQAEFKEITVTANSE-GANVSMA-VFRGGTRVGRSFRPDFLLVRQNLKD-- 226 red flour beetle
CCD79219     172 ILLVIDDTQTDWCKYFRGKKLMGDwEIKVEQAQFSEISLTAYSEQGCVVSIY-PDQIRSKPLKSFKPDFVLVRQHPSDL- 249 Schistosoma man...
XP_009162957 174 VLLVIDDSQTDWCKYFKGRKLLGDwDLRVEQANFSEITMTAYSERGCVINIY-QGLNQTKPVRSFKPDFVLLRQHSSG-- 250 Opisthorchis vi...
XP_015791998 184 ILLVIDDHQTDWSKYFRGKRLSGEfDIRVEQADFRELSVTTNSEHGALCSIItPERGGNRSAKTFRPDFLLVRQHVKDVA 263 two-spotted spi...
XP_009031524   7 CVLVIDDRHTDWFVYFRKLKVFGRmDIRVEQAEFRELNLTSFAGEGMVVHYR-TIHS-SFISRLFQPDIILVRQHARN-- 82  Helobdella robusta
CDS35822     140 ILLVIDHPLTDWAKYLHRRKIDGDwEVRVEQAQMNDISITAYPDQGCVVTVQ-DGRGARSAARMFKPDFVLIRQGLG--A 216 Echinococcus mu...
1I7L_A        83 ENEDFRHLVIGMQYAGLPS 101 Norway rat
XP_002428658 178 AGEDHKNLLLGFEFGGVPS 196 human body louse
XP_014274546 286 AGEDYKPILLGLKYGGVPS 304 brown marmorated stink bug
EHJ70300     325 AGADHRALLLGLKFGGVPS 343 monarch butterfly
KXZ75661     227 AGENYKKLLLALKFGGVPS 245 red flour beetle
CCD79219     250 -KENWQPILTGLMYGGTPc 267 Schistosoma mansoni
XP_009162957 251 ANEDWQPILTGLMYAGTPc 269 Opisthorchis viverrini
XP_015791998 264 T--DFNEILLGLKYGGVPS 280 two-spotted spider mite
XP_009031524  83 ATENWSQLLIGLMHGGVPS 101 Helobdella robusta
CDS35822     217 ATQHYENLITGFMFGAVPc 235 Echinococcus multilocularis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap