1NLQ,2P1B,3T30


Conserved Protein Domain Family
Nucleoplasmin

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pfam03066: Nucleoplasmin (this model, PSSM-Id:308605 is obsolete and has been replaced by 460792)
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Nucleoplasmin/nucleophosmin domain
Nucleoplasmins are also known as chromatin decondensation proteins. They bind to core histones and transfer DNA to them in a reaction that requires ATP. This is thought to play a role in the assembly of regular nucleosomal arrays.
Statistics
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PSSM-Id: 308605
Aligned: 38 rows
Threshold Bit Score: 103.045
Created: 25-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NLQ_A         6 FYGVTLTAESDSVTWDVD----------EDYA------R------------G----QKLVIKQILLGAEAKEnEFNVVEV 53  fruit fly
XP_002422837   6 FWGVTLSNTNKEVKWEPD----------ALKE------NggigeislsakgE----HTLIIKQALLSPSAKDsEVNVIEV 65  human body louse
XP_015371693   6 FWGVTLDKTKATEVWDPDvkpda-ndssHVFR------G------------E----HTLLVKQAVLGPEVPDdEVNVIEV 62  Russian wheat a...
Q2F5N9         6 FYGVTLSSSHQSETWDPEa--------kAEYP------R------------S----NKLVIRQALLGPDAKPdELNVIQV 55  domestic silkworm
EKC36195      89 VWACELSKEKPTFVFSFK----------EEDE------D------------EdyliHTLFLKNAVLGASAVEsERNLIQM 140 Pacific oyster
XP_002122436  11 FWCAKLDKKTKVNQWEGR----------D-DG------M------------M----EQLVLKRACIAPGAKEgERNLVEV 57  vase tunicate
XP_001635226   9 FWGCVLSKSEDTVTWNPE----------FDGEdtllgqI------------E----HKLVLSQACLGSKA-T-GKSMVEV 60  starlet sea ane...
EFX88002       7 FWGVQLDAKTKEIEWNPEknfpkeekedGMPI------P------------R----HSLMIKQAILSHEAAEgEMAVIEA 64  common water flea
XP_014255816   6 FWGVTLKKNKDKEVWDPDmkavd-gnesQGIR------G------------E----HTLLVKQIVLGADAKDgEVNVVEV 62  bed bug
XP_011674273   6 fwgATLSKDKKIFKWDPEsdflddedddEEDS------I------------S----HFLFLKQAVLGVEAKDdDRNVIEV 63  purple sea urchin
1NLQ_A        54 NTP----KDsvQIPIAVLKAGET-R-AVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 104 fruit fly
XP_002422837  66 ETTgy-kGNi-RQPIIALVGGKQ-Q-HLLLDLNFPDPPVMLRLIEGHGPVHISGNHV 118 human body louse
XP_015371693  63 EAMgy--kSdiKFPVVVLKGGTG-HsQCVLDLLFPDPPVTFKLVKGNGPIHLLGNHS 116 Russian wheat aphid
Q2F5N9        56 EAMsl-qEAv-KLPVAVLKVGES-R-HVRLDIEFPDAPVTFTLVQGSGPVHLIGHHL 108 domestic silkworm
EKC36195     141 ETKds-nRKdlKAPIVSLTLGKK-D-MCALD-LSFGEEVTFRLVEGSGPVFLSAQEL 193 Pacific oyster
XP_002122436  58 TSFnh-kQEkvEACICSLRSGSQ-E-DVALADLTIFPPAIFKLIQGNGPIHIVGNHM 111 vase tunicate
XP_001635226  61 TSMdf-kGDdsTHTIVSLREGAT-E-MCAL-NLAFSPPVTFKLASGNGPVHLTGNHV 113 starlet sea anemone
EFX88002      65 EAVgyaqSNi-KTLISVLVQGKD-H-QRSLDLVFHDAPVKLRLIKGSGPVHLVGAHG 118 common water flea
XP_014255816  63 EAMgy-kSDv-RFPIAVMKGGGPqS-QAVLDLLFPDPPVTFHLVKGSGPVHLLGNHT 116 bed bug
XP_011674273  64 ETInf-dGDtvIQPLLSLRLGLN-E-STNL-DIGLQPTVTFKLALGSGPVYRSGQHA 116 purple sea urchin
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