Conserved Protein Domain Family
BEX

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pfam04538: BEX (this model, PSSM-Id:309604 is obsolete and has been replaced by 461346)
Brain expressed X-linked like family
This is a family of transcription elongation factors which includes those referred to as Bex proteins as well as those named TCEAL7. Bex1 was shown to be a novel link between neurotrophin signalling, the cell cycle, and neuronal differentiation, suggesting it might function by coordinating internal cellular states with the ability of cells to respond to external signals. TCEAL7 has been shown negatively to regulate the NF-kappaB pathway, hence being important in ovarian cancer as it one of the genes frequently downregulated in this cancer. A closely related protein, TFIIS/TCEA, found in pfam07500 is involved in transcription elongation and transcript fidelity. TFIIS/TCEA promotes 3' endoribonuclease activity of RNA polymerase II (pol II) and allows pol II to bypass transcript pause or 'arrest' during elongation process. It is thus possible that BEX is also acting in this way.
Statistics
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PSSM-Id: 309604
Aligned: 69 rows
Threshold Bit Score: 58.8363
Created: 17-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9BXY8        14 VENVNQEND--EKdEKEQVANKGepl-alPLNVSEYCVPRGNRRR-FrVRQPILQYRWDIMHRLGEPQARMREENMERIG 89  human
Q3MKQ1        14 MENDHQEKE--EKeEKPQDANKRepvvalPFEAGEYYVPRGSRRR-FrVRQPIAHYRWDLMHRVGEPQGRMREENVQRFG 90  Norway rat
XP_011890565  14 VENVNQENDekDE-KEQVAN-KGepl-alPLNVGEYCVPRGNRRRfG-VRQPTLQYRWDIMHRLGEPQARVReENMERIG 89  sooty mangabey
XP_008271337  12 MENAQKEKE-----EKRQITNKEepm-alPLEAEEYLVPRGNRRR-FrTRQPIVHYRWDMMHRLGEPQARVREENMERFG 84  rabbit
XP_012013576  14 MENANEENE--KKdEKEQDANKGepl-alSLGAGEYCIPRGNRRW-FrVRQPILHYRWDMTQRLGKPRARMREENIERIG 89  mouflon
XP_003435428  14 MENTDQENK--KYdEKEQSTNKGepl-alPLETGEYCVPRVNRRR-FrVRQPILQYRWDVFQRLEEPQGRMREENMEKIG 89  dog
XP_008508744  14 MKNTNQENE--KKdEKEQDANKGehl-alPLETGECGVPRGNRGQ-IhVRQSILQYRWDMIQRLEEPQARMREENMERIG 89  Equus przewalskii
XP_006082359  14 VENANQENE--IKdEKEQDANKGe--------pGEYCVPRGNRRR-FrVRQPVLQYRWDGGQRLGEPQARMRQENRERVG 82  little brown bat
XP_006163610  14 VENGNKEDE--GKdEKEQDANKGepm-grPLEAGEHCVPRGNRRR-FrVRQPVLQYRWDTLHRLGVPQARMRKENMERFG 89  Chinese tree shrew
XP_006166113  14 MENAQKANE-----EQEQVANKGepv-tlPLEAREHCVPRGNRRR-FrVRQPILQYRWDLMHRLGEPQARMREENMGRFG 86  Chinese tree shrew
Q9BXY8        90 EEVRQLMEKLREKQlshslravstdPPHHDHHDEF 124 human
Q3MKQ1        91 EDMRQLMEKLRERQlshslravstdPPHHDHHDEF 125 Norway rat
XP_011890565  90 EEVRQLMEKLREKQlshslravstdPPHHDHHDEF 124 sooty mangabey
XP_008271337  85 EELRQLMQKLQEKQlshslravstdPPHHDHHDEF 119 rabbit
XP_012013576  90 EEMRQLMQKLREKQlshslravstdPPHHEHNDEF 124 mouflon
XP_003435428  90 EEMRQLMQKLKEKQfshslqavstdPPHRDHQDEF 124 dog
XP_008508744  90 EEVRQ----LREKQlshslravstdPPHHDHHDEF 120 Equus przewalskii
XP_006082359  83 EEMRQLMEKLRGKQlshslravstdPPHHDHHDEF 117 little brown bat
XP_006163610  90 EEVRHLMEKLREKQlshslqavsldPPHHGHRDEF 124 Chinese tree shrew
XP_006166113  87 EEVRHLMEKLREKQlshslravsldPPHHGHRDEF 121 Chinese tree shrew
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