3VIR


Conserved Protein Domain Family
Swi5

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pfam07061: Swi5 (this model, PSSM-Id:311177 is obsolete and has been replaced by 462077)
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Swi5
Swi5 is involved in meiotic DNA repair synthesis and meiotic joint molecule formation. It is known to interact with Swi2, Rhp51 and Swi6.
Statistics
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PSSM-Id: 311177
Aligned: 63 rows
Threshold Bit Score: 56.4039
Created: 22-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3VIR_A         7 ESRVHLLE---------QQKeqLESSLQDALAK--LKNr-dAKQTVQKHIDLLHTYNEIRDIALGMIGKVAEHEKCTSVE 74  Schizosaccharom...
Q8SVV2        41 CKDIEAAE---------AEL--WKKANCEMAEH--LGIe-dINKEVKRFISLLNTYNEVKDIGQELIGRIANLRQTTAKD 106 Encephalitozoon...
XP_003729883 131 ERENDKLR---------ARLseLDKEISELKDE--Gl----SEDELQLHIQKMHEYNELKDMTQMLLGRIAMFEGVTTRQ 195 purple sea urchin
XP_016291674  70 QQDVAEMQ---------LVLdeRLNTHNAARKKagLREq-tPQQVVDEYIALLTQYNRVKDAAQVVFDKIADIEQLPAKD 139 Pseudozyma bras...
XP_007603972  41 TTSIADVE---------RKF--YEEENAAIANE--LDLq-dVQKEMVSFIKKLNKYNQAKDIAQSLMGKIAELRGVTIKA 106 Vittaforma corn...
XP_001031477  98 DQQIKKFEpkkhedlndEQLqeYKAELIAAKSL--LEEkkkSLNTKSDKLKKIQERNEMKEVAGSIFQRIANIRNLTTKQ 175 Tetrahymena the...
CCO28330       2 nySRAAIS---------QEAenLQRDIDTLQKI--LGDe-dPQKIVDRHIKLLHMYNESKDAAQVILGRLAAIKQTPVST 69  Rhizoctonia sol...
NP_001313456  66 EEEVKELK---------KTQdcLDSEIASLEKE--GF----VVQELDQHIDLLHEYNDIKDIGQTLLGRLAGLRGVTTRD 130 zebrafish
XP_015236500  56 EEEVAELQ---------RKKeqLESEIARLEKE--GY----RVEELDQHIDKLHEYNDIKDIGQSLLGRIAALRGTTTRD 120 Cyprinodon vari...
KRY58361      25 pQSLSELL---------ETEkaLDTEIELLESR--GY----RVEDLDIYIEKLHVYNDLKDLCQMLLGQLAVLQEVTTRD 89  Trichinella bri...
3VIR_A        75 LFDRFGV 81  Schizosaccharomyces pombe 972h-
Q8SVV2       107 VHEELGM 113 Encephalitozoon cuniculi
XP_003729883 196 LHEEMGL 202 purple sea urchin
XP_016291674 140 IHSRYGV 146 Pseudozyma brasiliensis GHG001
XP_007603972 107 IHDEMEI 113 Vittaforma corneae ATCC 50505
XP_001031477 176 VFSEYGL 182 Tetrahymena thermophila SB210
CCO28330      70 IHEDYDL 76  Rhizoctonia solani AG-1 IB
NP_001313456 131 LYSHFGL 137 zebrafish
XP_015236500 121 LYTHFGL 127 Cyprinodon variegatus
KRY58361      90 LYKSFEL 96  Trichinella britovi
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