Conserved Protein Domain Family
YhhN

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pfam07947: YhhN (this model, PSSM-Id:311756 is obsolete and has been replaced by 429751)
YhhN family
The members of this family are similar to the hypothetical protein yhhN expressed by E. coli. Many are annotated as possible transmembrane proteins, and in fact they all have a high proportion of hydrophobic residues. A human member of this family, formerly known as TMEM86B, is a lysoplasmalogenase that catalyzes the hydrolysis of the vinyl ether bond of lysoplasmalogen. Putative conserved active site residues have been proposed for the YhhN family.
Statistics
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PSSM-Id: 311756
Aligned: 77 rows
Threshold Bit Score: 64.5838
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q21552        33 SYSFWKITPIILLVAFAYLn---GG----GLGKEQRKTaAAGLFFGGVGDWIIG-MRHDGIILGAVAFGIGHLFYLSLYR 104 Caenorhabditis ...
Q5BLD1        38 FSALIKCLPIFCLWVFLLAhginFL----GAHSSARKI-LAGLIFSALGDAFLIwQEQGYFSHGLLMFAITHILYSSAFG 112 zebrafish
Q3T0W0        46 VNVLLKILPVLYLAGFLGT----AH----PGGGYRALL-QGALLCSAVGDACLV--WPEALRYGMAAFGLAHLLYLRAFG 114 cattle
Q8N661        48 FAALVKCLPVLCLAGFLWV----MS----PSGGYTQLL-QGALVCSAVGDACLI--WPAAFVPGMAAFATAHLLYVWAFG 116 human
Q497J1        48 VSALIKCQPILCLVVFLWA----VA----PGGSSTWLL-QGALVCSAVGDACLI--WPEAFFYGTAAFSVAHLFYLGAFG 116 house mouse
Q8EXE4        26 LKIGSKIAPILVLIFFSFLe---GN----WKGKGGKFI-FAGLIFSLFGDAFLG-VPGNYFVFGLGSFLIAQILYSVGFS 96  Leptospira inte...
XP_001640871  62 FAALLKILPIACLCGFVTL----QGvsltKQHDYSRRI-LLGLIFSMIGDVCLV-WKHSYFIHGMVAFAIAHLLYMRSFG 135 starlet sea ane...
NP_001038833  39 wipdsapsllaagikaapilslvllvlsynggwslvgV-AGGLLLSAGGDCCLI-WPE-LFIHGMGCFALAHLLYSVTFL 115 zebrafish
ABQ13023      38 VSALIKCLPIFCLWLFLLAhglgFL----LTHPSATRI-FVGLVFSAIGDAFLIwQDQGYFVHGMLMFAVTHMLYASAFG 112 cattle
XP_001357764  98 WTTVLKCLPIVALMFYVVAngfsLK----KDYRRSLWI-LLGLVFSCGGDALLN---VNLFPFGMVSFGVAHVFYICAFG 169 Drosophila pseu...
Q21552       105 qh--atKIHTKFLLGMLAWALVIGQLCFIPMLADHr------gPLTVFASYSLLLSTCTLIAVSQYlngskS-------Q 169 Caenorhabditis ...
Q5BLD1       113 --------MKPLNSRAGLIIAVISGFSYTLLYPYLsg-----pFTYLVAVYIALIGFMGWRAIAGVqf-anD-------L 171 zebrafish
Q3T0W0       115 --------LTPLKPGLLLPLLLVSALYFRVLHPHMpp-----qVVWPLLAYSIVLVAMLWRGLARGg------------- 168 cattle
Q8N661       117 --------FSPLQPGLLLLIILAPGPYLSLVLQHLep-----dMVLPVAAYGLILMAMLWRGL----------------- 166 human
Q497J1       117 --------LTPLQPGLLLCTTLASLTYYSFLLLHLeq-----gMVLPVMAYGLILNSMLWRSLVWGg------------- 170 house mouse
Q8EXE4        97 -------VGNPVHIIRAVPYLVFGISFYIWILPGIgt-----aLYVPVGVYMIAICVMGWRSVSR------E-------C 151 Leptospira inte...
XP_001640871 136 --------FRPLKPLTGIICLLLMLPFYVFYFPNLkg-----lLFYAVPVYIVVIGIMVWRAITGLq----AqiysddgL 198 starlet sea ane...
NP_001038833 116 ssryssTSSSFSFIFLYLVLWVFGVGIYVYLMPFLqldpeadvLVPAIGGYVLLIVIMATMA------------------ 177 zebrafish
ABQ13023     113 --------MRPLGLRTGLLMVILSGLCYAFLYPNLtg-----aFTYIVGVYVAIIGFMGWRAMAGLql-vgA-------A 171 cattle
XP_001357764 170 --------WKPLKWPIGLALYVAVSLFVYFVHQKLde-----iLIIGVPIYCYLITTMLWRALARAv----D-------A 225 Drosophila pseu...
Q21552       170 NEEGLLYRAIGFFLFYISDSVLMLSHT-G-YWKLAPSFCVLSTYYSAQYFILFGN 222 Caenorhabditis elegans
Q5BLD1       172 WTWTKLSACLGAVLFMVSDLTIAVNKF-C-FPVPHSRAIIMATYYAAQMLIALSA 224 zebrafish
Q3T0W0       169 ------SAHWGALLFVLSDSVLAWNIF-T-YLVPHGHLLVMTTYYSAQMLITLSA 215 cattle
Q8N661       167 --AQGGSAGWGALLFTLSDGVLAWDTF-A-QPLPHAHLVIMTTYYAAQLLITLSA 217 human
Q497J1       171 ------SASWGAVLFTFSDGVLAWDTF-V-YSLPFARLVTMSTYYAAQLLLILSA 217 house mouse
Q8EXE4       152 SKSEFWKSLAGSLLFILSDSLIATRKF-TtVPIPWIGVWIMSTYYAAQFLIYESV 205 Leptospira interrogans
XP_001640871 199 WRWTKLCACLGALSFAISDAAIGLNKF-C-FPIPHSRAIIMFTYYGGQLGIALSt 251 starlet sea anemone
NP_001038833 178 ARTRRPLILLGSLVFMASDLTIALTKFnV-VDTEYKRHIIMVTYYLAQLMIALGd 231 zebrafish
ABQ13023     172 WRWTELAAGTGALLFIVSDLTIALDKF-C-FPVPYSRALIMSTYYAAQMLIALSa 224 cattle
XP_001357764 226 KNFLAIFCAVGAVLFVVSDALIAVTMF-VgVPLPCPRLQIMITYYAAQFAIALST 279 Drosophila pseudoobscura pseudoobscura
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