3FFZ,2VXR,3V0C,3OBR,4KBB,1FV2,3V0A,3VUO


Conserved Protein Domain Family
Toxin_R_bind_N

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pfam07953: Toxin_R_bind_N (this model, PSSM-Id:311760 is obsolete and has been replaced by 400348)
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Clostridium neurotoxin, N-terminal receptor binding
The Clostridium neurotoxin family is composed of tetanus neurotoxin and seven serotypes of botulinum neurotoxin. The structure of the botulinum neurotoxin reveals a four domain protein. The N-terminal catalytic domain (pfam01742), the central translocation domains and two receptor binding domains. This domains is the N-terminal receptor binding domain,which is comprised of two seven-stranded beta-sheets sandwiched together to form a jelly role motif. The role of this domain in receptor binding appears to be indirect.
Statistics
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PSSM-Id: 311760
Aligned: 19 rows
Threshold Bit Score: 168.714
Created: 20-Jul-2016
Updated: 4-Aug-2016
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3FFZ_B        859 NDKYVDTSGYDSNININGDVYKYP-TNKNQFGIYND-K-LsEVNISQNDYIIYDNKYKNFSISFWVRIPNYDN--Kiv-- 931  Clostridium b...
A5HZZ9        885 SNHLIDLSRYASKINIGSKVNFDP-IDKNQIQLFNL-E-SsKIEVILKNAIVYNSMYENFSTSFWIRIPKYFN--Si--- 956  Clostridium b...
Q3ZUA3         40 NDIISDISGFNSSVITYPDAQLVPgINGKAIHLVNN-E-SsEVIVHKAMDIEYNDMFNNFTVSFWLRVPKVSA--Shleq 115  Clostridium s...
2VXR_A         60 GGRLIDSSGYGATMNVGSDVIFND-IGNGQFKLNNS-E-NsNITAHQSKFVVYDSMFDNFSINFWVRTPKYNN--Ndiqt 134  Clostridium b...
Q8GR96        872 DNNLIDLSGYGANVEVYDGVELND---KNQFKLTSS-T-NsEIRVTQNQNIIFNSMFLDFSVSFWIRIPKYKN--Dgiqn 944  Clostridium b...
Q841S3        880 KNALVDTSGYNAEVRLEGDVQVNT-IYTNDFKLSSS-G-D-KIIVNLNNNILYSAIYENSSVSFWIKISKDLT--N---- 949  Clostridium b...
3V0C_A        885 SNHLIDLSRYASKINIGSKVNFDP-IDKNQIQLFNL-E-SsKIEVILKNAIVYNSMYENFSTSFWIRIPKYFN--Si--- 956  Clostridium b...
WP_011987710  878 NNKFIDISGYGSNISINGDVYIYS-TNRNQFGIYSS-KpS-EVNIAQNNDIIYNGRYQNFSISFWVRIPKYFNkvN---- 950  Clostridium b...
4KBB_A         40 DNNLIDLSGYGAKVEVYDGVELND---KNQFKLTSSaN-S-KIRVTQNQNIIFNSVFLDFSVSFWIRIPKYKN--Dgiqn 112  Clostridium b...
1FV2_A         50 NDIISDISGFNSSVITYPDAQLVPgINGKAIHLVNN-E-SsEVIVHKAMDIEYNDMFNNFTVSFWLRVPKVSA--Shleq 125  Clostridium t...
3FFZ_B        932 nVNNEYTIINCMrDNN----S-----GWKVSLNHNEIIWTLQDNAGINQKLAFNyGNANGISDYI-NKWIFVTITNDRLG 1001 Clostridium b...
A5HZZ9        957 sLNNEYTIINCM-ENN----S-----GWKVSLNYGEIIWTLQDTQEIKQRVVFKySQMINISDYI-NRWIFVTITNNRLN 1025 Clostridium b...
Q3ZUA3        116 yGTNEYSIISSMkKYSlsigS-----GWSVSLKGNNLIWTLKDSAGEVRQITFR-DLSDKFNAYLaNKWVFITITNDRLS 189  Clostridium s...
2VXR_A        135 yLQNEYTIISCI-KND----S-----GWKVSIKGNRIIWTLIDVNAKSKSIFFEySIKDNISDYI-NKWFSITITNDRLG 203  Clostridium b...
Q8GR96        945 yIHNEYTIINCI-KNN----S-----GWKISIRGNRIIWTLTDINGKTKSVFFEySIREDISDYI-NRWFFVTITNNS-D 1012 Clostridium b...
Q841S3        950 -SHNEYTIINSI-KQN----S-----GWKLCIRNGNIEWILQDINRKYKSLIFDySESLSHTGYT-NKWFFVTITNNIMG 1017 Clostridium b...
3V0C_A        957 sLNNEYTIINCM-ENN----S-----GWKVSLNYGEIIWTLQDTQEIKQRVVFKySQMINISDYI-NRWIFVTITNNRLN 1025 Clostridium b...
WP_011987710  951 -LNNEYTIIDCIrNNN----S-----GWKISLNYNKIIWTLQDTAGNNQKLVFNyTQMISISDYI-NKWIFVTITNNRLG 1019 Clostridium b...
4KBB_A        113 yIHNEYTIINCM-KNN----S-----GWKISIRGNRIIWTLIDINGKTKSVFFEyNIREDISEYI-NRWFFVTITNN-LN 180  Clostridium b...
1FV2_A        126 yGTNEYSIISSM-KKH----SlsigsGWSVSLKGNNLIWTLKDSAGEVRQITFR-DLPDKFNAYLaNKWVFITITNDRLS 199  Clostridium t...
3FFZ_B       1002 DSKLYINGNLIDQKSILNLGNIHVSDNILFKIVNCSY-TRYIGIRYFNIFDKEL 1054 Clostridium botulinum
A5HZZ9       1026 NSKIYINGRLIDQKPISNLGNIHASNNIMFKLDGCRDtHRYIWIKYFNLFDKEL 1079 Clostridium botulinum A str. Hall
Q3ZUA3        190 SANLYINGVLMGSAEITGLGAIREDNNITLKLDRCNNnNQYVSIDKFRIFCKAL 243  Clostridium sp. RKD
2VXR_A        204 NANIYINGSLKKSEKILNLDRINSSNDIDFKLINCTDtTKFVWIKDFNIFGREL 257  Clostridium botulinum
Q8GR96       1013 NAKIYINGKLESNIDIKDIGEVIANGEIIFKLDGDIDrTQFIWMKYFSIFNTEL 1066 Clostridium botulinum
Q841S3       1018 YMKLYINGELKQSERIEDLNEVKLDKTIVFGIDENIDeNQMLWIRDFNIFSKEL 1071 Clostridium botulinum
3V0C_A       1026 NSKIYINGRLIDQKPISNLGNIHASNNIMFKLDGCRDtHRYIWIKYFNLFDKEL 1079 Clostridium botulinum
WP_011987710 1020 NSRIYINGNLIDEKSISNLGDIHVSDNILFKIVGCND-TRYVGIRYFKVFDTEL 1072 Clostridium botulinum
4KBB_A        181 NAKIYINGKLESNTDIKDIREVIANGEIIFKLDGDIDrTQFIWMKYFSIFNTEL 234  Clostridium botulinum
1FV2_A        200 SANLYINGVLMGSAEITGLGAIREDNNITLKLDRCNNnNQYVSIDKFRIFCKAL 253  Clostridium tetani
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