Conserved Protein Domain Family
Adaptin_binding

?
pfam10199: Adaptin_binding (this model, PSSM-Id:313434 is obsolete and has been replaced by 462994)
Alpha and gamma adaptin binding protein p34
p34 is a protein involved in membrane trafficking. It is known to interact with both alpha and gamma adaptin. It has been speculated that p34 may play a chaperone role such as preventing the soluble adaptors from co-assembling with soluble clathrin, or helping to remove the adaptors from the coated vesicle. Another possible function is in aiding the recruitment of soluble adaptors onto the membrane.
Statistics
?
PSSM-Id: 313434
Aligned: 29 rows
Threshold Bit Score: 40.9325
Created: 27-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
A5DMM1       176 DKLGIDRLVELFDTHDWSD-IETSEDDG------------------------------FAARKRKMAESMCQRLLDDDEK 224 Meyerozyma guil...
Q0UDD8       171 EKVGVHRVRESLEACEWES-AEGIDFGAdedgeegfg-------------gfaaeeaeMNMELFDMKGALHGFDDEEAGE 236 Parastagonospor...
Q5BBS4       297 ELQGMRRIKEVLETHEWAG-DEEGEVDTslpdddddlerellgldkeatsgfkdevdeLQREMVGLRFAIGR-------- 367 Aspergillus nid...
Q0D030       250 EYQGMRRVREVLETHQWAAaESDAKSDdgdadelerellg-----lddeagfdwevgeLEREMVGLRFAMERGEEFE--- 321 Aspergillus ter...
A0C1I4       172 ETLGFPRIIEIMECNTWTY-MRPKSQE-------------------------------KKENTGKTKVSEKQTQGLDQLE 219 Paramecium tetr...
Q6C1W1       173 ETTGYDRLQEAIEVLGWET-QDEAKETPvpd-------------------------piLTSPTLMARSSPSLHASSFDAR 226 Yarrowia lipoly...
O13827       150 EKVGLDRVREILDCCEWNL---------------------------------------SQVDKSFSEEKDDAGDFYLPER 190 Schizosaccharom...
XP_001271901 281 EYQGMRRIKEILETHDWSAaAEDADGEEsgmldeddleaell--glnaengfnlevneLEREMLGLRMAIERG------- 351 Aspergillus cla...
XP_001402030 286 ELQGMRRIKEVLETHDWAA-TEDAETGLlhdgvdddlerellg-lddadngfdlevdeLQREMVGLRMAIERG------- 356 Aspergillus nig...
XP_001544263 313 EFQGMARVKEVLQTNEWAS-IRQGDLSTdflldsded------------fgfdneaseLEREMLGLKLAIEKGADE---- 375 Ajellomyces cap...
A5DMM1       225 dmsseNgv-----------nDVNVEEFENVIEKLKQARIKAESMEGAERNEYAQQVMED 272 Meyerozyma guilliermondii ATCC 6260
Q0UDD8       237 psaeaE--------------AKEVEELEVMMRKMIAVKEMGEGMEEAERKRFAAKAVND 281 Parastagonospora nodorum SN15
Q5BBS4       368 -----Cgdgnvd--edegdeELRVDAVEALLARMRAIKDMSAELPEKERKRFAAKAVAD 419 Aspergillus nidulans
Q0D030       322 -----Gddqgeg--dgdgddERRVESVEGLLLRMQAIRDMSDELPEQERKRFAARAVRD 373 Aspergillus terreus NIH2624
A0C1I4       220 ---------------------FEDDQFAQLMHDMTKIRTSK--MTDEERREKAANLMNQ 255 Paramecium tetraurelia
Q6C1W1       227 slslsPadsdm----lkgllNDDLDNFQNIFDKLKIARNSN--LSDEQRTRLANDLAEQ 279 Yarrowia lipolytica
O13827       191 fkgspDmq-----------sT----DLDNLMKEMNQIRDAD--LEKNEKKAKALNLLEK 232 Schizosaccharomyces pombe 972h-
XP_001271901 352 -----Gdgiged--eddnddGLQVDSLEALMMRMQAIRDMSAELPEGERKKFAAKAVRD 403 Aspergillus clavatus NRRL 1
XP_001402030 357 -----Ggdgfdd--ddegdeELRVDAVEALLLRMRAIKDISDELPEAERKRFAAKAVRD 408 Aspergillus niger CBS 513.88
XP_001544263 376 -----TgagepdlkshdeedELHVEKIDGLMLRMKAIKDMAAELPEAERRAFAVKAIND 429 Ajellomyces capsulatus NAm1
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap