Conserved Protein Domain Family
Cupredoxin_1

?
pfam13473: Cupredoxin_1 (this model, PSSM-Id:316034 is obsolete and has been replaced by 379208)
Cupredoxin-like domain
The cupredoxin-like fold consists of a beta-sandwich with 7 strands in 2 beta-sheets, which is arranged in a Greek-key beta-barrel.
Statistics
?
PSSM-Id: 316034
Aligned: 60 rows
Threshold Bit Score: 66.4487
Created: 28-Jul-2016
Updated: 4-Aug-2016
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q46BR6         35 IFALLIVALLITS--TGFa---A-AKEAT-IVVKSADTsanrvaifsAFSPEKIEIHSGENVTwINFKKPKAS--V--VL 103 Methanosarcina...
Q1GB09         16 GLIIWWFFGNFQK--SSQqadlA-NGRQE-GQVVVK-G---------GYEPEVLYLKQGVPAE-VTFKMEDKT--AclSH 78  Lactobacillus ...
22_pfamImport   1 LMALVVWWFWLSHrkSTA----Q-AATQE-ATIIVEDG---------VYSPASIRANTGQSLT-LHFDRRDPS--PcaEQ 62 
Q15U28         11 LIAAIVWWFWLYT--PKR----AqSTSNQ-IKILVNNG---------VYQPSNITVSAGTKIT-LDFDRQDPA--PcaET 71  Pseudoalteromo...
Q3IJ88         11 LIIAIVYWFWLFK--PKQv---Q-SNDNK-VVIVVDNG---------IYQPAQIKVVAGKELT-LNFDRQDSA--PcsET 71  Pseudoalteromo...
6_pfamImport    1 LIALIVWWFWLYK--PQQl---K-LGEGD-LVIAVENG---------TYSPSRIKIPEGKPVE-LKFLRKDQS--PcsET 61 
35_pfamImport   1 LIALIMWWFWLYK--PKE----AvLGDND-LLITVENG---------TYSPSRIKVPAGSVVE-IKFIRKDQS--PcsET 61 
7_pfamImport    1 LIAFIVWWFWLYQ--PKP----QvFDTQH-QVIKVNSG---------VYLPAKLMLKANQAVQ-LRFLREDEA--AcsQT 61 
Q089I9         11 LIALIVWWFWLYK--PKA----T-THQAT-NAIVVKDG---------VYSPARITVPANTATQ-LTFLRQDKAgcS--AS 70  Shewanella fri...
9_pfamImport    1 GF--IIWWFWLYK--PAN----D-SSVDAsTLILVKDG---------VYTPARIKISANRPTE-ITFLRQDKSgcS--AT 59 
Q46BR6        104 VSADELWEETTLNYGKAFSFTF--ENPGTYSFTLKDNPDiKGTVTV 147 Methanosarcina barkeri str. Fusaro
Q1GB09         79 VVFSSLGVDKDLSKEKLAKIQIptDKAGEIDYACGMGMF-HGKIVV 123 Lactobacillus delbrueckii subsp. bulgaricus ATCC...
22_pfamImport  63 VIFQGLDTSAFLETGKTTTLTLdnLPAGKHRFTCQMQMY-QGTLIV 107
Q15U28         72 VIFPQLDLSLALKMGQSNRIELpaLSEGQYDFHCQMQMY-KGKLIA 116 Pseudoalteromonas atlantica T6c
Q3IJ88         72 VIFPQLDISKTLVMGDANTLKIpeLKVGEYDFHCQMQMY-KGKLIV 116 Pseudoalteromonas haloplanktis TAC125
6_pfamImport   62 LLIPKLEISETLPSNKLKQIQIpaLEPGEYDFHCQMQMY-RGKLVV 106
35_pfamImport  62 LLIPKLQISETLPLNKIKTIQLssLKAGEYDFHCQMQMY-RGQIVA 106
7_pfamImport   62 LVIPDLGISVDLSLGKETRVDLppLAKGEYAFHCQMQMY-RGQLLV 106
Q089I9         71 LLFPDLDISEELPLDKSVVISLpaLAKGEYPFHCQMQMY-KGVLLV 115 Shewanella frigidimarina NCIMB 400
9_pfamImport   60 VLLPYLEISQDLALDKTTTIALpaLEKGEYPFHCQMQMY-KGVLIV 104
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap