Conserved Protein Domain Family
SRCR_2
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pfam15494: SRCR_2 (this model, PSSM-Id:317845 is obsolete and has been replaced by 464747)
Scavenger receptor cysteine-rich domain
SRCR_2 is a scavenger receptor cysteine-rich domain family found largely on vertebrate sequences up-stream of the trypsin-like transmembrane serine protease, Spinesin.
Links
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Statistics
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PSSM-Id: 317845
Aligned: 35 rows
Threshold Bit Score: 65.841
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q4RRR7        28 LLEIQLGKLPTWLPVCYERWNSSLGTLVCRQLGYLRLTKHKGVNLTDIGPNYTDGFIQI-------TPEHNSNLeNIWQ- 99  spotted green p...
XP_016853787 178 LLRVFSAAEQEWLPVCSQDWTAAFAQKTCQQLGFGNVSETDSVTLSHSGKS-------Ll------PAALKDTIqQSLN- 243 green anole
NP_001179855 116 VLQVFTA--ATWRTVCAEDWKSHHATVACAQLGFPSYVSSDTLRVDSLEEQFREDFVSInhllpddKVTA---LhHSVY- 189 cattle
XP_010722704 138 VLQVFTS--GSWRTVCSDDWKAEYGNTTCKHLGFSSYVSSGYLPVAAVEKQFQRHFVSLshwlpmdQVTS---LhNATN- 211 turkey
XP_002940514 140 VLQAYTA--GSWRTVCSDEWKGLYGNLTCKQLGFSSYVSSIYLPVEAVEEQFRRHFVSVtpspkfaGQTSl--LqQLIN- 214 western clawed ...
XP_011606710  97 VLQVYSPG-SGWRSVCSDGWKQQHTEAACKKLGYTYKPRSSTVPVGDLIQS-----LKMgpftairNELTstpIhQATI- 169 torafugu
NP_001119849 104 VLQVYINA-SGWRTVCADNWRTKHTRLTCQQLGYTVSPRSTRIPVRSLFFNPQNEFATVs------NDSAqsdIqSFLS- 175 zebrafish
XP_010722109 185 ILQVLNRNTGAWSCICSDHFSPALAKAACEEMGYSSIPTFYAVDAGAGQPLPPREL-VL--------------SsGRLQl 249 turkey
OCA29261     561 VLQLYVQARSSWSFICNDNWDTNKAKAVCAQVGFYSEPVSGTVSISDLSTSSALLYSTV-------QVLSdksIqVNPT- 632 western clawed ...
EFB25343     152 LLKVYSGSSHQWLPICSDSWNDSYSEKTCQQLGFVSAYRTTEVAHRDLASSF-----SI--------SKYnstLqESLY- 217 giant panda

Q4RRR7       100 --LRGSCVTGKVISLQCFECGTRA 121 spotted green pufferfish
XP_016853787 244 --RTSECPSRRYVTLRCSSCGQRl 265 green anole
NP_001179855 190 --TREGCTSGHVVTLKCSACGLRT 211 cattle
XP_010722704 212 --LREECNSGSVIALKCLACGMRA 233 turkey
XP_002940514 215 --PSEYCSSGNVITLKCVVCGLRP 236 western clawed frog
XP_011606710 170 --DRSQCSSGSVVSLSCSDCGQVG 191 torafugu
NP_001119849 176 --ASNKCSSGSVVSVSCSDCGEVV 197 zebrafish
XP_010722109 250 pePGRKCLSGSVVSLLCSSCGESV 273 turkey
OCA29261     633 --VWGSCTSGQVVSLRCAACGTgh 654 western clawed frog
EFB25343     218 ---RSECPSQRYVSLQCSHCGLRa 238 giant panda
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