Conserved Protein Domain Family
SOSSC

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pfam15925: SOSSC (this model, PSSM-Id:318196 is obsolete and has been replaced by 374228)
SOSS complex subunit C
SOSS complex subunit C is a component of the SOSS complex, a single-stranded DNA binding complex involved in genomic stability, double-stranded break repair and ataxia telangiectasia-mutated-dependent signaling pathways.
Statistics
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PSSM-Id: 318196
View PSSM: pfam15925
Aligned: 9 rows
Threshold Bit Score: 83.358
Threshold Setting Gi: 327263669
Created: 29-Jul-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
B4QQE2        17 ILEEIQT-Kkq----lLAGGIinlglSPPN---------QMPAPQLLGQ-------PTTVN---PDFqagvgIATNatst 72  Drosophila simu...
B4MXH8        17 ILEEIQT-Kkq----lLAGGIinlglSNTN---------QMPAPQLLGQ-------PTTTTa-tPDL-----VSTNst-p 68  Drosophila will...
A7RTB3        16 ILQGLEEkKrq----mMNQQQ-----GGGAgpl---------------------pgPSHVAr-pPTDagntsASRI---- 60  starlet sea ane...
ETN63758      16 ILEDIQI-Kkq----lLQKGGnstsaGFAN----------LYTPSSVFSgp---qyAANNTg-aP-LatdgcVNAV---- 71  Anopheles darlingi
EHJ70851      17 ILEELQL-Kkq----mLMKQGavaplTATTi--------SLAQPSPVSQlpmcsipPLSATagfPQLpeaniVNTS---- 79  monarch butterfly
XP_015793098  17 aLEDVQK-Kqq----lLKQSQlvgqaSVTNnpgt--nqaFIDTNYSINMtnn-----------------nmsLGSN---- 68  two-spotted spi...
XP_002115327  17 ILDQINN-RrafqkdgAAKRPnvrsqGPA-----------SATAHRVPQqqrslrnPPNAGp-pPLIpgnqvESSI---- 79  Trichoplax adha...
XP_003216640  18 ILAELDKeKrk----lLMQNQ-----SSTNhpgarilqpLYQT-YELPImktmdpcIsl------------sRSSL---- 71  green anole
XP_003436928  15 ILEDIQM-Kkq----lLQKGVnshspGFGNlynsslgfgSLYTPSPLFQlpk--htPATATg-qPnd----sNQSI---- 78  Anopheles gambi...
B4QQE2        73 ARS-----------------A-------------------FNPTSSTTLGFFIPQDSYFGNSFIPVLPRL 106 Drosophila simulans
B4MXH8        69 PRA-----------------A-------------------FNPTSSTTLGFFIPQDSYFGNSLIPVLPRL 102 Drosophila willistoni
A7RTB3        61 HEPivrypnqthqlaisqrqA-------------------LEHAHSVSPGFYITQDSMYGNLILPVIPRV 111 starlet sea anemone
ETN63758      72 AKA-----------------V-------------------WNQAITQSFGSFIPQDSVFGNCILPVLPRY 105 Anopheles darlingi
EHJ70851      80 HRA-----------------A-------------------LQHANATSWGFFVSQDSSFGNQILPVLPRF 113 monarch butterfly
XP_015793098  69 NSNqr-------------erS-------------------AYHAHQNTFGYFITQDSAFGNLILPVLPRF 106 two-spotted spider mite
XP_002115327  80 RKD-----------------AntshnppapassndqislaLQHARTTTPGYYIGQDSKFGNLILPVLPEF 132 Trichoplax adhaerens
XP_003216640  72 NKDfrdhaeqq-hiaaqqkaA-------------------LQHAHAHSSGYFITQDSAFGNLILPVLPRL 121 green anole
XP_003436928  79 SKG-----------------V-------------------WSQAINQSFGFFVPQDSLFGNNILPVLPRY 112 Anopheles gambiae str. PEST
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