Conserved Protein Domain Family
Tub_N

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pfam16322: Tub_N (this model, PSSM-Id:318529 is obsolete and has been replaced by 465092)
Tubby N-terminal
Tub_N is the N-terminal region of Tubby proteins. It carries a nuclear localization signal and is able to activate transcription.
Statistics
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PSSM-Id: 318529
Aligned: 26 rows
Threshold Bit Score: 98.3768
Created: 3-Aug-2016
Updated: 4-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_012919598  27 HQRRLFEKKQRRKRQEPLMVQANPDAS--LWPRRPWRREerlagdssLGNPFLQE------------------------- 79  domestic ferret
XP_009301456  37 RQRALLEQKQKKKRQEPLMVQSNLDGR--SRVRRTRQSE--------EQAPLVESylsgnsstiyhvq------------ 94  zebrafish
XP_008288639  29 RQRALLEQKQKKKRQEPLMVQSNVDGR--SRARRTKQSE--------EQAPLVESylssnsstiyhvq------------ 86  bicolor damselfish
XP_015193927  18 RQRALLEQKQKKKRQEPLMVQANVDGR--SRTRRAKQSE--------EQAPLVESylssnsstiyhvq------------ 75  spotted gar
XP_005989763 119 RQRALLEQKQKKKRQEPLMVQSNVDSR--SRTRRMKQSE--------EQAPLVESylnsnsstiyhvq------------ 176 coelacanth
XP_015719583  35 RQRALLEQKQKKKRQEPLMVQSNVDSR--TRARRTKHSE--------EQAPLVESylnsnsstiyhvq------------ 92  Japanese quail
XP_003961503  13 NQRTLLMKKQQKKRADAQMVIANRDIRqkQKNRKQKTVQs-------DETPLLISqslsntslcdqvehahdnpldeitl 85  torafugu
CAG04375      13 NQRIILMKKQQKKRADTQMVIANRDIRqkQKNRKQKALHs-------DETPLLISqsls--------------------- 64  spotted green p...
XP_014325614  13 NQRALLMKKQQKKRADAQMVVANRDAR--QKNRKHKTVNs-------EEMPLLISqslsstslsdqvehahdnpldeitl 83  southern platyfish
XP_003199647  13 nqrsllikkqqrrradarMVTANPDIC--SKTRKQKPEC--------DDTVLLISqsqsntslndtqpehiyentveeic 82  zebrafish
XP_012919598  80 ---------------------------------NVPEAHLRs---gVHsAL-----------------GI-VSCGGDGSG 105 domestic ferret
XP_009301456  95 --------------------eaeqeevkavaevQAPRSAKK-----SK-PP-----------------TStPQTGSAKKE 131 zebrafish
XP_008288639  87 --------------------eaeqeevkvisdtQPPRSAKK-----GKaSA-----------------SStPQTGSDKKE 124 bicolor damselfish
XP_015193927  76 --------------------eaeqedvkvvtdpQAPRSAKK-----AK-SA-----------------PSaSQTGSAKKE 112 spotted gar
XP_005989763 177 --------------------eaehddikmvtdiQAPKSTKK-----TK-SA-----------------ATsSQTGSARKE 213 coelacanth
XP_015719583  93 --------------------eaeqedvkvvvdaQAPKSTKK-----AK-AA-----------------SAsCQTGSARKE 129 Japanese quail
XP_003961503  86 ge-----cdvmetlmldekpaggqmnleidkgpEVKSERENd---pQVetkktkkkrekkekckarcqiseeskdeevkg 157 torafugu
CAG04375      65 -----------------------------stslCDQVEHAHdnpldEItLGecdvtetvmideipagrKTnVETDEEPEV 115 spotted green p...
XP_014325614  84 gegdvnessepdeippekpvtpktmdlqvdqepEVNGKEENv---aPEeAK-----------------KTkKKDVKKDKT 143 southern platyfish
XP_003199647  83 l------gelsvssrteeaseeiaqtvpviikkIDLEISPKh---sTTsTL-----------------DTdGQADEKKTK 136 zebrafish
XP_012919598 106 EHG------PLAS-------------------------------PtEG---DSSDPELEEVSV----------------- 128 domestic ferret
XP_009301456 132 KKGkh---kGIDG-------------------------------P-AAfqdEGQELGNQIQILtvghs------------ 164 zebrafish
XP_008288639 125 RKGkh---kAIDG-------------------------------L-ASqqdD-----SPIQILtvg-------------- 150 bicolor damselfish
XP_015193927 113 KKGrh---kGIDG-------------------------------P-AAfqdEALDLGNQIQILtvg-------------- 143 spotted gar
XP_005989763 214 KKGkh---kGIDG-------------------------------P-AAfqdEVQEVGSQIHILtvg-------------- 244 coelacanth
XP_015719583 130 KKGkh---kGIDG-------------------------------P-AAfqdDVQKAGSQVQILtvg-------------- 160 Japanese quail
XP_003961503 158 kekngkksnkegkstpslatlnsnyretsssssdsnesscspmsvddlkefalrpaprdvtiqcrvtrdrrgmekgiypt 237 torafugu
CAG04375     116 KSEgeddpqeeekkt------------------------rkkqgkkdkpkeKNPEVSLPNIDLvseik------------ 159 spotted green p...
XP_014325614 144 KRVeeteeelekekeketkekkakkrdkvkesvdtqkkskqerkkkhlqedSTPETKPEVKDEtlknk------------ 211 southern platyfish
XP_003199647 137 KKGvkkgqtKLLE-------------------------------PkAAlevEENEKKEK-KSVkkkektngtkgraktge 184 zebrafish
XP_012919598 129 ---------------EDVPASPPPYKEpPGtrrrgwpaHqrpgas----aeeesEPRDVGNEYEAPs------------- 176 domestic ferret
XP_009301456 165 ----------paqesEAEGQGEAVGST-HS--------Q---------------GKQDLRVTMLKK-------------- 196 zebrafish
XP_008288639 151 ------------hnsTDEGEAEPVMSCtQS--------Q---------------SKQDLRVTMLKK-------------- 181 bicolor damselfish
XP_015193927 144 ------------qssICEGEGDPVTST-QQ--------Q---------------GKQDLRVTMQKK-------------- 173 spotted gar
XP_005989763 245 ------------qssLDDGDGETVASG-QQ--------Q---------------GKQDLRVTMQKK-------------- 274 coelacanth
XP_015719583 161 ------------qssHDEDDGEKMATGqQQ--------Q---------------SKQDLKTAMQKKdphantswssstsq 205 Japanese quail
XP_003961503 238 yylhlekedgkrvflmagrkrkkcktsnylistdptnlsrdtscyigklrsnvlgtkftvynggenpekkpfvqeseslr 317 torafugu
CAG04375     160 ----------glekdEDEDSGQEEEDEsKSpp----tpSpqrkrqldisrcqisEESKDEEVQKKek------------- 212 spotted green p...
XP_014325614 212 ----------rneseKDEEDPREPKTPsPMk-------Kktldts----rcqisDESNDEEIqe---------------- 254 southern platyfish
XP_003199647 185 qssvqtdsvvdfsinEEKKPESESEDEgKDw-----------------------SKSPVPPTPKKKq------------- 228 zebrafish
XP_012919598 177 ---------pQPNPGMDDDlgrgdlasnkgedlEEKKEESes-rvRTSPPAAE-EVSETPEGEVGAGSSDVGSSPRAP 243 domestic ferret
XP_009301456 197 ----------GISSSMNFD--------------EEEDEDD-----LVSSSSSQlNSNTRPGSATSKKSSKEATSASTP 245 zebrafish
XP_008288639 182 ----------GISSSMNFD--------------EEEDDDD-----EISSSSSQlNSNTRPGSATSKKSCKEVASAPTP 230 bicolor damselfish
XP_015193927 174 ----------GISSSMNFD--------------EEEDEED-----EDSSSSSQlNSNTRPGSATSKKSNKEAASASTP 222 spotted gar
XP_005989763 275 ----------GISSSMNFD--------------EEEDEED-----EDSSSSSQlNSNTRPGSATSKKSNKETASAPTP 323 coelacanth
XP_015719583 206 sslvaldhapGISSSMNFD--------------EEEDEED-----ADSSSSSQlNSNTRPGSATSKKSSKEVASAPSP 264 Japanese quail
XP_003961503 318 qelaavcyetnvlgfkgprkmtviipgmlendervsihpkheletlltrhanrntdklvtlvnksptwneqtqsyvln 395 torafugu
CAG04375     213 -------------------------------nvKKSNKEE-----KSTPSLASlNSNYKDSSLSSSDSNERVSphpgl 254 spotted green puf...
XP_014325614 255 -------------------------------esEQKKENKskkteKTPSTLASyNSNCRETSSSGSEHNERvtspmsm 301 southern platyfish
XP_003199647 229 ---------mKPMRCHLSDsee---------enDEKEEKDkkkeaKKTPKKSKkNTKSVNSLASLNSNYKEHSSDSDS 288 zebrafish
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