Conserved Protein Domain Family
Ig6_Contactin

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cd04970: Ig6_Contactin (this model, PSSM-Id:319279 is obsolete and has been replaced by 409359)
Sixth immunoglobulin (Ig) domain of contactin
Ig6_Contactin_like: Sixth Ig domain of contactins. Contactins are neural cell adhesion molecules and are comprised of six Ig domains followed by four fibronectin type III (FnIII) domains anchored to the membrane by glycosylphosphatidylinositol. The first four Ig domains form the intermolecular binding fragment, which arranges as a compact U-shaped module via contacts between Ig domains 1 and 4, and between Ig domains 2 and 3. Contactin-2 (TAG-1, axonin-1) may play a part in the neuronal processes of neurite outgrowth, axon guidance and fasciculation, and neuronal migration. This group also includes contactin-1 and contactin-5. The different contactins show different expression patterns in the central nervous system. During development and in adulthood, contactin-2 is transiently expressed in subsets of central and peripheral neurons. Contactin-5 is expressed specifically in the rat postnatal nervous system, peaking at about 3 weeks postnatal, and a lack of contactin-5 (NB-2) results in an impairment of neur onal act ivity in the rat auditory system. Contactin-5 is highly expressed in the adult human brain in the occipital lobe and in the amygdala. Contactin-1 is differentially expressed in tumor tissues and may, through a RhoA mechanism, facilitate invasion and metastasis of human lung adenocarcinoma.
Statistics
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PSSM-Id: 319279
Aligned: 5 rows
Threshold Bit Score: 139.61
Created: 22-Feb-2007
Updated: 18-Aug-2016
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P28685     519 ENLTLQCHasHDPTMDLTFTWSLDDfpidldkseghyrrasvkeavGDLAIvnaqLKHSGRYTCTAQTVVDsTSESATLT 598  chicken
2497301    520 ENATMQCAasFDPALDLTFVWSFNGyvidfnkenihyqrnfmldsnGELLIrnaqLKHAGRYTCTAQTIVDnSSASADLV 599  human
XP_785256  518 QSTTLKCKaaHDEYLELTYLWEHNGveidlsei-----eryrmrdnGNLEIvsaqLRDGGEYTCVALTVADsDRSSATLD 592  purple urchin
XP_414435  515 ESIVLPCQvsHDHSLDIVFTWSFNGhlidfekdgdhfervggqdsaGDLMIrsiqLKHAGKYVCMVQTSVDkLSAAADLI 594  chicken
NP_571521  525 ENATLQCHasHDPTMDLTFTWSLNGvpldleepnghyrrmegketiGDLVIvngqLSHAGTYTCTAQTVVDsAMASAKLV 604  zebrafish
P28685     599 VRGPP 603  chicken
2497301    600 VRGPP 604  human
XP_785256  593 IAGPP 597  purple urchin
XP_414435  595 VRGPP 599  chicken
NP_571521  605 VRGPP 609  zebrafish
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