Conserved Protein Domain Family
RING-HC_MIBs

?
cd16519: RING-HC_MIBs (this model, PSSM-Id:319433 is obsolete and has been replaced by 438182)
RING finger, HC subclass, found in mind bomb MIB1, MIB2, and similar proteins
MIBs are large, multi-domain E3 ubiquitin-protein ligases that promote ubiquitination of the cytoplasmic tails of Notch ligands. They are also responsible for TBK1 K63-linked ubiquitination and activation, promoting interferon production and controlling antiviral immunity. Moreover, MIBs selectively control responses to cytosolic RNA and regulate type I interferon transcription. Both MIB1 and MIB2 have similar domain architectures, which consist of two Mib-Herc2 domains flanking a ZZ zinc finger, a REP region including two tandem Mib repeats, an ANK region that spans ankyrin repeats, and a RNG region, where MIB1 and MIB2 contain three and two C3HC4-type RING-HC fingers, respectively. This family corresponds to the first RING-HC finger of MIB1 and MIB2, as well as the second RING-HC finger of MIB1.
Statistics
?
PSSM-Id: 319433
Aligned: 7 rows
Threshold Bit Score: 62.1624
Created: 7-May-2013
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Zn binding siteRING-HC finger
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:Based on the structural evidence that Homo sapiens RNF123 (2MA6) binds two Zn2+ ions through its RING-HC finger.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #           # #   #  #        #  # 
Q86YT6        818 ECMVCSDmkrdtlFGPCGHIaTCSLCSPRv--KKCLICK 854  human
Q96AX9        889 ECLVCSElallvlFSPCQHRtVCEECARRm--KKCIRCQ 925  human
Q86YT6        865 ECVVCSDkkaavlFQPCGHMcACENCANLm--KKCVQCR 901  human
XP_002736376  828 DCRMCSKpvn-cqFQPCGHMvACMDCSLVf--KKCFQCK 863  Saccoglossus kowalevskii
KOF83884      192 DCLLCSDkqatvkFQPCGHVvTCEDCSLKimiKKCIQCK 230  Octopus bimaculoides
XP_011668768 1131 DCRMCQKpan-cqFKPCGHQvACMDCAVLf--QKCFSCK 1166 purple sea urchin
NP_001121594  670 PCRSCNQtac-vkFDPCGHVvVCKKCSYIv--KKCLQCG 705  Ciona intestinalis

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap