Conserved Protein Domain Family
RING-HC_SIAHs

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cd16571: RING-HC_SIAHs (this model, PSSM-Id:319485 is obsolete and has been replaced by 438233)
RING finger, HC subclass, found in Drosophila melanogaster protein Seven-in-Absentia (sina) and its homologs
The family includes the Drosophila melanogaster protein Seven-in-Absentia (sina), its mammalian orthologs, SIAH1 and SIAH2, plant SINA-related proteins, and similar proteins. The Drosophila homolog sina plays an important role in the phyllopod-dependent degradation of the transcriptional repressor tramtrack as for the formation of the R7 photoreceptor in the developing eye of Drosophila melanogaster. Both of SIAH1 and SIAH2 are E3 ubiquitin-protein ligases, mediating the ubiquitinylation and subsequent proteasomal degradation of biologically important target proteins that regulate general functions, such as cell cycle control, apoptosis, and DNA repair. They are inducible by the tumor suppressor and transcription factor p53. SIAH2 can also be regulated by sex hormones and cytokine signaling. Moreover, they share high sequence similarity, but possess contrary roles in cancer, with Siah1 more often acting as a tumor suppressor while Siah2 functions as a proto-oncogene. Plant SINAT1-5 are putative E3 ubiquitin ligase involved in the regulation of stress responses. All family members possess two characteristic domains, an N-terminal C3HC4-type RING-HC finger and a C-terminal tumor necrosis factor (TNF) receptor associated factor (TRAF)-like substrate-binding domain (SBD).
Statistics
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PSSM-Id: 319485
Aligned: 19 rows
Threshold Bit Score: 50.7462
Created: 24-Jul-2013
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding siteRING-HC finger
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:Based on the structural evidence that Homo sapiens Parkin (5C1Z) binds two Zn2+ ions through its RING-HC finger.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1          #  #          #   #  #  #          #  # 
Q8IUQ4        39 FECPVCFDYvlPPILQCQSGHLVCSNCRPKLt----CCPTCR 76  human
Q8S3N1        44 LECPVCTNSmyPPIHQCHNGHTLCSTCKSRVh---nRCPTCR 82  thale cress
CBY20594      85 FECPVCYDYvlPPIHQCSIGHLICGQCRPKLq----SCPTCR 122 Oikopleura dioica
XP_002108034  49 FECPVCYDYvlPPIKQCTRGHLICEKCRLKIl----KCPVCN 86  Trichoplax adhaerens
EFX80560     236 IECPVCLEPicPPVHQCRRGHLVCGKCKSQLh----QCPTCR 273 common water flea
Q8T3Y0       104 LECPVCFGYimPPIMQCPRGHLICSTCRSKLt----ICPVCR 141 fruit fly
EFJ33962       3 LDCSVCMESltPPIFQCSNGHIACQSCRSKIs---dVCPTCS 41  Selaginella moellendorffii
ADE77080      65 FECSICMEPlsPPIFQCSNGHIACSSCCVMMd---nRCPSCL 103 Sitka spruce
CDI79026     276 LECGVCMERmqPPIYQCKEGHTLCCSCQQRLn----SCPTCR 313 Eimeria acervulina
EKX40175      29 LDCTVCFDSiaGPVFQCTEGHLLCQTCWSRLntpdaGCPTCS 70  Guillardia theta CCMP2712

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