Conserved Protein Domain Family
beta_Kdo_transferase_KpsC
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cd16437: beta_Kdo_transferase_KpsC 
beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase KpsC
KpsC is a beta-3-deoxy-D-manno-oct-2-ulosonic acid (Kdo)-transferase. It is part of the ATP-binding cassette transporter dependent capsular polysaccharides (CPSs) synthesis pathway, one of two CPS synthesis pathways present in Escherichia coli. The poly-Kdo linker is thought to be the common feature of CPSs synthesized via this pathway. CPSs are high-molecular-mass cell-surface polysaccharides, that are important virulence factors for many pathogenic bacteria. KpsC contains a domain duplication.
Links
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Statistics
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PSSM-Id: 319745
Aligned: 4 rows
Threshold Bit Score: 423.839
Created: 22-Mar-2016
Updated: 2-Oct-2020
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P42217   367 CVVWGVKgeqqwra-eaqrksLPLWRMEDGFLRSsglgsdllpPLSLVLDKRGIYYDATRPSDLEVLLNHsqltlaqQMR 445 Escherichia coli
CDG55977  56 VIGWGLKptsvsarqyaqrhqLIYIALEDGFLRSlglgvngfqPHSLVVDETGIYYDASRPSDLENWLNTasfnneeLEQ 135 Halomonas sp. A3H3
CDG55977 382 LLVWSSRidadfkc-qhaqhmGKLWRMEDGFIRSvglgvdltqPLSLVIDSQGIYYDPSQPSDLETLLNSapfsddlLQR 460 Halomonas sp. A3H3
P42217    39 IAVWGHRpsaakpvaiakaagKPVIRLEDGFVRSldlgvngepPLSLVVDDYCIYYDASKPSALEKLVQDkagntalISQ 118 Escherichia coli

P42217   446 AEKLRQrLVESKLSKYNlgadfslpaeakdkKIILVPGQVEDDASIktgtvsikSNLELLRTVRErnphaYIIYKPHPDV 525 Escherichia coli
CDG55977 136 AERCMAlIARYRLSKYNhspdqp--indasrASVLVVDQTAGDASIhyggasasSFNQMLEAALAehpdaEILVKIHPDV 213 Halomonas sp. A3H3
CDG55977 461 ALQLRKrLVALKLSKYNvrgksgi-elpkgrYTILVPGQVESDASIatgsphinTNSGLLRAVREahpdaFIVYKAHPDV 539 Halomonas sp. A3H3
P42217   119 AREAMHtIVTGDLSKYNlapafva-desersDIVLVVDQTFNDMSVtygnagphEFAAMLEAAMAenpqaEIWVKVHPDV 197 Escherichia coli

P42217   526 lvgnrkgnipteliaELADYQALDADIIQCIQradeVHTMTSLSGFEALLHGKQVHCYGLPFYAGWGLTVDehhcpr--- 602 Escherichia coli
CDG55977 214 iagkkqghllnaadhPRCRVIGEDLNPWALFDqvdhVYVVTSQLGFEALLAGKQVHCFGIPFYAGWGLTHDqlpchr--- 290 Halomonas sp. A3H3
CDG55977 540 lsgarvg-aldtdakRLYDLDASDIDIATLLErvdaVHTMSSLTGFEALLRKREVSTYGLPFYAGWGLTQDalscpr--- 615 Halomonas sp. A3H3
P42217   198 legkktgyfaalratQRVRLIAENVSPQSLLRhvsrVYVVTSQYGFEALLAGKPVTCFGQPWYAGWGLTDDrhpqsalls 277 Escherichia coli

P42217   603 -reqklTIADLIYQTLIVYPTY 623 Escherichia coli
CDG55977 291 -rrvkrTLVEVFAAAYLRYCRY 311 Halomonas sp. A3H3
CDG55977 616 -rtrslSLDALVAGTLILYPGY 636 Halomonas sp. A3H3
P42217   278 arrgsaTLEELFAAAYLRYCRY 299 Escherichia coli
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