4IB4,5TVN


Conserved Protein Domain Family
7tmA_5-HT2

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cd15052: 7tmA_5-HT2 
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serotonin receptor subtype 2, member of the class A family of seven-transmembrane G protein-coupled receptors
The 5-HT2 receptors are a subfamily of serotonin receptors that bind the neurotransmitter serotonin (5HT; 5-hydroxytryptamine) in the central nervous system (CNS). The 5-HT2 subfamily is composed of three subtypes that mediate excitatory neurotransmission: 5-HT2A, 5-HT2B, and 5-HT2C. They are selectively linked to G proteins of the G(q/11) family and activate phospholipase C, which leads to activation of protein kinase C and calcium release. In the CNS, serotonin is involved in the regulation of appetite, mood, sleep, cognition, learning and memory, as well as implicated in diseases such as migraine, schizophrenia, and depression. Indeed, 5-HT2 receptors are attractive targets for a variety of psychoactive drugs, ranging from atypical antipsychotic drugs, antidepressants, and anxiolytics, which have an antagonistic action on 5-HT2 receptors, to hallucinogens, which act as agonists at postsynaptic 5-HT2 receptors. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320180
Aligned: 12 rows
Threshold Bit Score: 318.874
Created: 13-Nov-2008
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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Conserved site includes 24 residues -Click on image for an interactive view with Cn3D
Feature 1:ligand binding site [chemical binding site]
Evidence:
  • Structure:4IB4: Human 5-HT2B receptor binds ergotamine, a precursor of the hallucinogen lysergic acid diethylamide, contacts 4A.
    View structure with Cn3D
  • Structure:5TVN: Human 5-HT2B receptor binds Lysergic acid diethylamide (LSD), contacts at 4A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                    ##  
4IB4_A        30 HWAALLILMVIIPTIGGNTLVILAVSLEKKlqyaTNYFLMSLAVADLLVGLFVMPIALLTIMfeamWPLPlvlCPAWLFL 109 
5TVN_A        15 HWAALLILMVIIPTIGGNTLVILAVSLEKKlqyaTNYFLMSLAVADLLVGLFVMPIALLTIMfeamWPLPlvlCPAWLFL 94  
P35363        75 NWSALLTTVVIILTIAGNILVIMAVSLEKKlqnaTNYFLMSLAIADMLLGFLVMPVSMLTILygyrWPLPsklCAVWIYL 154  house mouse
AAC16969     280 TWSILIMAPLVIFGIAGNTLVILAISLEKRlqnvTNYFLLSLAVTDLLVSLIVMPFSIINVFtg-rWLFGfvlCDFFVTS 358  great pond snail
EDW15902      83 NYWALLALVLVFGTAAGNILVCLAIAWERRlqnvTNYFLMSLAITDLMVAVLVMPLGILTLVkg-hFPLSsehCLTWICL 161  Drosophila moj...
EKC24231      37 KWGVLAIIFIVFCTALGNLLVCLAVIWDRRlqnmTNYFLMSLAIADFLVSILVMPFGMIVELfg-dFPLRpefCIFWVTM 115  Pacific oyster
EKC24230      65 NWPILFLTPLIFFGVGGNILVCMAISLEKRlqsvTNYFLLSLAITDLLVCIIVMPFTVINDFag-yWLFGpiiCNLYVTA 143  Pacific oyster
AAC78396      21 VLALLLLPLLCAVGLLGNLLVCMAIWFDRRlhnvTNYFLFSLALADLFVCSIVMPLSLLVEVrhgvWTWSfsvCLLYVYA 100  pig roundworm
NP_001024729   8 GVALFLLPVLCLIGLIGNFLVCVAIATDRRlhnvTNYFLFSLALADLLVCCIVMPLSIVVEVrhgvWTWSvsmCLLYVYS 87   nematode
ELU01723       5 NWAVLFLFLIVVAAIGGNILVCLAVRQERKlqsmFNFFLVSLALSDMLSATLVMPLSIVKSLiadqLPVPklmCVAWYSL 84   Capitella sp. ...
ELU17504      45 NWEALLLLLVVFAGVLGNVLVCVAISVEKKlqniTNYFLMSLAVADLFVSLLVMPCSIVSEFmg-yWPFGlvmCDLWQVA 123  Capitella sp. ...
P28335        54 NWPALSIVIIIIMTIGGNILVIMAVSMEKKlhnaTNYFLMSLAIADMLVGLLVMPLSLLAILydyvWPLPrylCPVWISL 133  human
Feature 1        ##  ##                                                                    ###   
4IB4_A       110 DVLFSTASIWHLCAISVDRYIAIKKPiqan-qynsRATAFIKITVVWLISIGIAIPVPIKGietdv-dnpnnITCVLtke 187 
5TVN_A        95 DVLFSTASIWHLCAISVDRYIAIKKPiqan-qynsRATAFIKITVVWLISIGIAIPVPIKGietdv-dnpnnITCVLtke 172 
P35363       155 DVLFSTASIMHLCAISLDRYVAIQNPihhs-rfnsRTKAFLKIIAVWTISVGISMPIPVFGlqdds-kvfkeGSCLLa-- 230  house mouse
AAC16969     359 DVLMCTSSILHMCTISLERYIGIRYPlwtk--nksKRIVLLKIVLVWTIALAITSPITVLGivkad-nvlfqGACVLn-- 433  great pond snail
EDW15902     162 DVLFCTASIMHLCTISVDRYLSLRYPmrfg-rnktRRRVTLKIVFVWLLSIAMSLPLSLMYskdha-svlvnGTCQIp-- 237  Drosophila moj...
EKC24231     116 DVLMCTASIWHMCTMSMDRYFTLKYPmkyg-rnktKMTVALKILFVWLVSITISSPICVYGisdtn-svfnhGQCVPa-- 191  Pacific oyster
EKC24230     144 DVLMCTASILHLCTISLDRYMAIRSPlttr--nisKSVVVIKLAIVWVTSIAISSPITILGfines-nvfsnQHCALs-- 218  Pacific oyster
AAC78396     101 DVFLCTASIVHMSMISLDRFLGISRPlkir--nrsRTMTTLKITFVWLITILISCPIAIAAlidpt-nilqrNSCAIs-- 175  pig roundworm
NP_001024729  88 DVFLCSASIVHMSVISLDRYLGISQPlrtr--nrsKTLIFIKIAIVWVVTLLVSCPIAVLAmhdta-nilrnNQCMIf-- 162  nematode
ELU01723      85 DVLLTSSTIIHLCMISIDRYMSLKFPlryghakrsCKQTLFKILLVWVISFCIAGPLFLFSmldttqsavayKGCGPe-- 162  Capitella sp. ...
ELU17504     124 DVMMCTSSIMHMCTISLDRYMGIREPlkmr--nksRTVVAVKMGIVWLLSFLIASPLIILGifkpedilsedLQCGIf-- 199  Capitella sp. ...
P28335       134 DVLFSTASIMHLCAISLDRYVAIRNPiehs-rfnsRTKAIMKIAIVWAISIGVSVPIPVIGlrdeekvfvnnTTCVLn-- 210  human
Feature 1            ##  ##  #                                                                   
4IB4_A       188 rFGDFMLFGSLAAFFTPLAIMIVTYFLTIHALqkkaadlednwetlndnlkviekadnaaqvkdaltkmraaaldaqkat 267 
5TVN_A       173 rFGDFMLFGSLAAFFTPLAIMIVTYFLTIHALqkkaadlednwetlndnlkviekadnaaqvkdaltkmraaaldaqkat 252 
P35363       231 -DDNFVLIGSFVAFFIPLTIMVITYFLTIKSLqkeatlcvsdlstraklssfsflpqss--------------------- 288  house mouse
AAC16969     434 -NEHFIIYGSICAFFIPLAIMVLMYALTVKMLntqarlcqsrgaedgegqpmirrstsrrnwqtrrqfygrevlsvassy 512  great pond snail
EDW15902     238 -DPVYKLVGSIVCFYIPLGVMLLTYCLTVRLLarqrqnlgggqptsavtpgwasgwlgqapalerrctwrrllkpgqsha 316  Drosophila moj...
EKC24231     192 -IRDFVIYGSIFAFYIPLTIMLITYILTIRILwknqklmktidrsdlktlqkhsekcelktllcppsddkdksnalsdsd 270  Pacific oyster
EKC24230     219 -NGNFKIYGSVCAFFIPLLIMVLSYGLTLYTLisqsqklhaqgkeneqpvirrslsrkplkrgtrvrfqtrnrsthhqee 297  Pacific oyster
AAC78396     176 -NRYYMVYGSTFAFLIPFIVMAVTYTKTTTLLkkqasqlsqrasnrsnglrrtlphrrlgqssmsngmlhknsvniggys 254  pig roundworm
NP_001024729 163 -SRYYIIYGSTMTFLIPLCIMGVTYAKTTQLLnkqasilsqkagdkfngnglrrtmphrklgyartysatvngtiangka 241  nematode
ELU01723     163 -TPAFVISATVTSFYLPLLIMTIMYALTMRALrcqlheqrrlavtnslssrddstysl---------------------- 219  Capitella sp. ...
ELU17504     200 -NIHFLIYGSLTAFFIPLLIMLVCYSLTIHILyrqaqkcadkksnagmrrstvrrrpkkk-------------------- 258  Capitella sp. ...
P28335       211 -DPNFVLIGSFVAFFIPLTIMVITYCLTIYVLrrqalmllhghteeppglsldflkcckrnta----------------- 272  human
Feature 1                                                                                        
4IB4_A       268 ppkledksp----------------------------------------------------------------------- 276 
5TVN_A       253 ppkledksp----------------------------------------------------------------------- 261 
P35363           --------------------------------------------------------------------------------      house mouse
AAC16969     513 sgtrnneydsaagmncpsihqryrplginrhntiplchhyhhhsrhqyhhhhhgnqdgsprieqagsgggggpgsnvgsn 592  great pond snail
EDW15902     317 stvlhahsanstdtdlstldnhelwlpdssipeptpttmtalhqfgaemlklsrglesvasssttgsptksefsisnnlp 396  Drosophila moj...
EKC24231     271 psvlgtllntpkcdsslqsqttllpnggpcslpnpstsqkfhskysimcvdnvkeqneldmvqikpsnpvvrlrmeekss 350  Pacific oyster
EKC24230     298 adehlytpiinrksipktslhssmenmcetssqkgtcats---------------------------------------- 337  Pacific oyster
AAC78396     255 slrgthpp------------------------------------------------------------------------ 262  pig roundworm
NP_001024729 242 igahgrtmssisni------------------------------------------------------------------ 255  nematode
ELU01723         --------------------------------------------------------------------------------      Capitella sp. ...
ELU17504         --------------------------------------------------------------------------------      Capitella sp. ...
P28335           --------------------------------------------------------------------------------      human
Feature 1                                                                                        
4IB4_A           --------------------------------------------------------------------------------     
5TVN_A           --------------------------------------------------------------------------------     
P35363           --------------------------------------------------------------------------------      house mouse
AAC16969     593 nsinslhrgrnssnnnsa-------------------------------------------------------------- 610  great pond snail
EDW15902     397 yssspqrfsthqqqqqhnqqqqqqqqqqhqqhlqhahgssylqqtspkgkqssnilglssttlglerestrnslassrmg 476  Drosophila moj...
EKC24231     351 aegdskldqkassmlclktladqepssyssicrkpqrsyplmsgrgdnflrinsndslvkrslakasvsvhqavscstvn 430  Pacific oyster
EKC24230         --------------------------------------------------------------------------------      Pacific oyster
AAC78396         --------------------------------------------------------------------------------      pig roundworm
NP_001024729     --------------------------------------------------------------------------------      nematode
ELU01723         --------------------------------------------------------------------------------      Capitella sp. ...
ELU17504         --------------------------------------------------------------------------------      Capitella sp. ...
P28335           --------------------------------------------------------------------------------      human
Feature 1                                                                                        
4IB4_A           --------------------------------------------------------------------------------     
5TVN_A           --------------------------------------------------------------------------------     
P35363           --------------------------------------------------------------------------------      house mouse
AAC16969         --------------------------------------------------------------------------------      great pond snail
EDW15902     477 eqsdgtlsqlsqrlraykkrrrassaasgrerragsedaededqdtlrrckrynslpknalythhktlhesqddddneaa 556  Drosophila moj...
EKC24231     431 tsnsiisnlvpcsgnshfhscsdigkkdlklvewkenyskiqkemdqilkgdfdkddf---------------------- 488  Pacific oyster
EKC24230         --------------------------------------------------------------------------------      Pacific oyster
AAC78396         --------------------------------------------------------------------------------      pig roundworm
NP_001024729     --------------------------------------------------------------------------------      nematode
ELU01723         --------------------------------------------------------------------------------      Capitella sp. ...
ELU17504         --------------------------------------------------------------------------------      Capitella sp. ...
P28335           --------------------------------------------------------------------------------      human
Feature 1                                                                                        
4IB4_A           --------------------------------------------------------------------------------     
5TVN_A           --------------------------------------------------------------------------------     
P35363           --------------------------------------------------------------------------------      house mouse
AAC16969         --------------------------------------------------------------------------------      great pond snail
EDW15902     557 gaepeddderldtqaaktsksssmskschsdtevepqqgklyhvpsssnhqsdypqlpsvctcpyfgdrplqscvktaev 636  Drosophila moj...
EKC24231     489 ----------------------------vcnrshflaqvqsskltpsgseesvwskeiheepkiddshqnsaddrdnkgl 540  Pacific oyster
EKC24230         --------------------------------------------------------------------------------      Pacific oyster
AAC78396         --------------------------------------------------------------------------------      pig roundworm
NP_001024729     --------------------------------------------------------------------------------      nematode
ELU01723         --------------------------------------------------------------------------------      Capitella sp. ...
ELU17504         --------------------------------------------------------------------------------      Capitella sp. ...
P28335           --------------------------------------------------------------------------------      human
Feature 1                                                                                        
4IB4_A           --------------------------------------------------------------------------------     
5TVN_A           --------------------------------------------------------------------------------     
P35363           --------------------------------------------------------------------------------      house mouse
AAC16969     611 --------------------------------------------------------------------gannnnsnnagg 622  great pond snail
EDW15902     637 kiissafkvttvttatavssspsemdlllcsasnnksaltgsvsvgaaaaavpgggvggasantlspnsahqtpgscltv 716  Drosophila moj...
EKC24231     541 ivkhlqqisdnsekhacddddscideltrsdcqliprteasqqftmainnnnhhtafskcvtetsllnvqhvtshgmtls 620  Pacific oyster
EKC24230         --------------------------------------------------------------------------------      Pacific oyster
AAC78396         --------------------------------------------------------------------------------      pig roundworm
NP_001024729     --------------------------------------------------------------------------------      nematode
ELU01723         --------------------------------------------------------------------------------      Capitella sp. ...
ELU17504         --------------------------------------------------------------------------------      Capitella sp. ...
P28335           --------------------------------------------------------------------------------      human
Feature 1                                                                                        
4IB4_A       277 -----------------------------------------------------------------------------dsp 279 
5TVN_A       262 ----------------------------------------------------------------------------dspe 265 
P35363           --------------------------------------------------------------------------------      house mouse
AAC16969     623 nvessslntatsnnnnilrrgrystqngrtgpnyvlrssppdypycnghqeemtsdvtsdsrncctssssssspssstre 702  great pond snail
EDW15902     717 hsdgsgflaapgtpcpgrrklsisktasvvtwdssrhrrrgssfggartsllltptktasstatttttttplrrsatlrs 796  Drosophila moj...
EKC24231     621 cpcgsrkmsqssidistcsrhstapsesgdslndpsetsessecltiklrpdtlhmcsipnqkssspstpllgsrgrlyn 700  Pacific oyster
EKC24230     338 ----------------------------------------------plidnhhqsrkiptkefsmsdsschlnidhgsnd 371  Pacific oyster
AAC78396     263 -----------------------------------------------------------------------------lli 265  pig roundworm
NP_001024729 256 ------------------------------------------------------------------------angetadr 263  nematode
ELU01723         --------------------------------------------------------------------------------      Capitella sp. ...
ELU17504         --------------------------------------------------------------------------------      Capitella sp. ...
P28335           --------------------------------------------------------------------------------      human
Feature 1                                                                                 #  ##  
4IB4_A       280 emkdfrhgfdilvgqiddalklanegkvkeaqaaaeqlkttrnayiqkylqtiSNEQRASKVLGIVFFLFLLMWCPFFIT 359 
5TVN_A       266 mkdfrhgfdilvgqiddalklanegkvkeaqaaaeqlkttrnayiqkylvqtiSNEQRASKVLGIVFFLFLLMWCPFFIT 345 
P35363       289 --------------------------lsseklfqrsihrepgsyagrrtmqsiSNEQKACKVLGIVFFLFVVMWCPFFIT 342  house mouse
AAC16969     703 pkrlrelvrkhhvavkaanillmkregqqtltqgqiptpsssayasvrrdnsvRTEQKASKVLGVVFMIFVVCWAPFFTV 782  great pond snail
EDW15902     797 hqnmnyqgggeggksrtphsspcllqrqqtvrshhsrnssvisrnssrhgriiRLEQKATKVLGVVFFTFVILWSPFFVL 876  Drosophila moj...
EKC24231     701 gssrqlcngtskhhsssghelnngvlkthtihrllsrlnksqrmmpvmskratTNERKASKVLGIIFAVFVILWTPFFTV 780  Pacific oyster
EKC24230     372 qskeivpwtrtrlilpnghtsnlrglvrkhqlvlkatsillmkkthikklddvHTEQKASKVIGIVFIIFVVCWAPFFIL 451  Pacific oyster
AAC78396     266 edelqltalpsdsknkeergklrrigartssaifavtsrisrkssllitsqdlANEHKATRVLAVVFGCFFVCWTPFFAA 345  pig roundworm
NP_001024729 264 lgtsrpsintnghkqlqkastinkwksrtsnlvtnfankvgrrsslqtatqdlANEHKATRVLAVVFACFFICWTPFFFI 343  nematode
ELU01723     220 ---------------------------rrasprasprlphksnnnsngffsvaGRRRRAVQVLGILFAVFVICYLPFFLT 272  Capitella sp. ...
ELU17504     259 -------------------------aekespptphqcqavvsthnkgvrtsvvTANDPAVKVLGTMFAIFVLSWGPFFSL 313  Capitella sp. ...
P28335       273 ----------------------eeensanpnqdqnarrrkkkerrprgtmqaiNNERKASKVLGIVFFVFLIMWCPFFIT 330  human
Feature 1        #  #            #  ##  #   #                     
4IB4_A       360 NITLvlcds-cnqttLQMLLEIFVWIGYVSSGVNPLVYTLFNktFRDAF 407 
5TVN_A       346 NITLvlcds-cnqttLQMLLEIFVWIGYVSSGVNPLVYTLFNktFRDAF 393 
P35363       343 NIMAvickescnenvIGALLNVFVWIGYLSSAVNPLVYTLFNktYRSAF 391  house mouse
AAC16969     783 NILTalct---scrfEPTLITAFVWLGYVSSTLNPIIYTIFNniFRITF 828  great pond snail
EDW15902     877 NLLPtvcae-ceeriSHWVFDVVTWLGYASSMVNPIFYTIFNkvFRQAF 924  Drosophila mojavensis
EKC24231     781 NILSvtceh-cmqnvTPELMSVFVWMGYTASLANPIIYTMFNtaFRRAF 828  Pacific oyster
EKC24230     452 NIMTplck---dcriQPALFASFNWLGYISSTLNPIIYTMFNktFKLTF 497  Pacific oyster
AAC78396     346 NFAVgfcge--scavPPGIASLFLWLGYVSSTINPLIYTIFNrrFRQAF 392  pig roundworm
NP_001024729 344 NFLIgfgge--nvqiPDWVASIFLWLGYVSSTINPIIYTVFNkrFRQAF 390  nematode
ELU01723     273 YVIKgtcrs-cepyiSPRMIMAFEWLAYSGSVINPIIYHIFNpdFRRAF 320  Capitella sp. I Grassle & Grassle, 1976
ELU17504     314 NLANgice---icqiEEIVFKVFLWLGYLSSTLNPIIYTIFNrkFKRTF 359  Capitella sp. I Grassle & Grassle, 1976
P28335       331 NILSvlcekscnqklMEKLLNVFVWIGYVCSGINPLVYTLFNkiYRRAF 379  human

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