Conserved Protein Domain Family
7tmA_TAARs

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cd15055: 7tmA_TAARs 
trace amine-associated receptors, member of the class A family of seven-transmembrane G protein-coupled receptors
The trace amine-associated receptors (TAARs) are a distinct subfamily within the class A G protein-coupled receptor family. Trace amines are endogenous amines of unknown function that have strong structural and metabolic similarity to classical monoamine neurotransmitters (serotonin, noradrenaline, adrenaline, dopamine, and histamine), which play critical roles in human and animal physiological activities such as cognition, consciousness, mood, motivation, perception, and autonomic responses. However, trace amines are found in the mammalian brain at very low concentrations compared to classical monoamines. Trace amines, including p-tyramine, beta-phenylethylamine, and tryptamine, are also thought to act as chemical messengers to exert their biological effects in vertebrates. All GPCRs have a common structural architecture comprising of seven-transmembrane (TM) alpha-helices interconnected by three extracellular and three intracellular loops. A general feature of GPCR signaling is agonist-induced conformational changes in the receptors, leading to activation of the heterotrimeric G proteins, which consist of the guanine nucleotide-binding G-alpha subunit and the dimeric G-beta-gamma subunits. The activated G proteins then bind to and activate numerous downstream effector proteins, which generate second messengers that mediate a broad range of cellular and physiological processes.
Statistics
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PSSM-Id: 320183
Aligned: 51 rows
Threshold Bit Score: 319.5
Created: 13-Nov-2008
Updated: 17-Oct-2022
Structure
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Aligned Rows:
  next features
Feature 1:putative ligand binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                   #   #
O14804        35 LVIYLACAAGMLIIVLGNVFVAFAVSYFKAlhtpTNFLLLSLALADMFLGLLvLPLSTIRSVesCWFFGdflCRLHTYLD 114 human
AAC82382      32 TAALSAITTLILATVLGNLLIITSIAYFRQlqtrTNIMALSLAVADLLVGLTvMPYSMMKAVykCWFYGqffCNLQYFLD 111 European river ...
AAC82381      32 VVLIWVFTIIITITVVGNILTIVSILYFRQlqtrTNVLALSLALADFLVGCLiMPFSVMRTAysCWFYGqlmCRIHTWLD 111 European river ...
AAC82383      32 LVLLIVFAFFITATILGNLLIITAIASFTKlqthANFLALSLAVSDLLVGVFiMPLSMMKTVydCWFYAsvlCNAHYFLD 111 European river ...
XP_006626542  34 ILLYILLSTGMIITIFGNLVVMISITYFKQlhtpTNMLVLSLALADFLLGMSvMPFSMIRSVetCWYYGdmfCQLHSSFD 113 spotted gar
XP_006013505  34 VLLYILFLGAILITICGNLVVIISISHFKQlhspTNLLILSLAMTDLLLGLLvMPFSMIRSVetCWYFGdtfCLLHSSFD 113 coelacanth
XP_002935532  26 LILYLLTSGLIMTTFLGNILVISSIVYFKQlrspTNSFVLSLAVADFLVGVMvMPYSMVRSIegCWYFGsgfCRLHSSLD 105 western clawed ...
CDQ64394      34 IASYFFFVSVMLVTILGNGVVIISVAHIKQlhtpTNILIMSLAVADLLVGVTvMPFSTIKAVegCWYFGd--AFCFLHSD 111 rainbow trout
XP_006626543   2 LYILLLTGILITVCGNLVVIISISHFKHLHt--pTNLLVLSMAVADFLLGLFvMPFSMIRSVetCWYFGdtfCFFHAKID 79  spotted gar
XP_007903758  32 VTTLSVLTIITLLTVLGNVLVIASIAYFTKlqtpTNAFILSLATADILVGLVvMPFSMVKAVf-GWYFGrifCKIHSIMD 110 elephant shark
Feature 1        #  ##                                                                           
O14804       115 TLFCLTSIFHLCFISIDRHCAICDPllyp--skftVRVALRYILAGWGVPAAYTSLFLYTDvvetrlsqwleempCVGSC 192 human
AAC82382     112 YMLTNSSIMHLGCIAYDRYVAICDPlryp--qrvtNHTVVTMLLISWFGPALFSSPILVNFnpewsrg-nieiisCPNQC 188 European river ...
AAC82381     112 YTFTTCSIFNLACISIDRYVAISDPlrydqrvtyrILAVMLTICWGNIIPYGVSYMLKLNIngiesv---vaaksCPDNC 188 European river ...
AAC82383     112 YTLTTATILHITCIAYDRYVAICDPlrya--trvtVRTIAALLVLCWLGAAIFSSPILLSFsptlsrg-nierasCPDDC 188 European river ...
XP_006626542 114 MFLTTVSIFHLIFIALDRYQAVCNPlhyy--skitNRVAWLMIGVSWGVAAIYTYGLLYSRgnaeglneyvsstyCLGSC 191 spotted gar
XP_006013505 114 MLLTSVSIYHLIFIAVDRYYAVCKPllys--tkitIPVAGVFVTISWVVSVINTYGSLYSKdhsegiedyiasisCQGNC 191 coelacanth
XP_002935532 106 VMLCSASILHLSCIAFDRYYAVCNPllyg--ykmsTRRVSILICTCWFIPVLISFAPIMLGlhllg----mehlwQEGAC 179 western clawed ...
CDQ64394     112 MFLTSVSIFHLVFIAIDRYESVCSPlrys--tkitIPIAWLMVFASWAVAALYSYGLLYSKanvrgldefiasiyCLGSC 189 rainbow trout
XP_006626543  80 LILSTVSVFHLIFIAIDRYYAVCDPllys--skvtMPVAWLFVTVSWIAAVVYICVLITFKgntdgm---dgfdpCPGDC 154 spotted gar
XP_007903758 111 VMLCTSSIVNLSCIAFDRYFAVCYPlkyr--ftmsRKRVTFLLLICWILPALVSIVPLVLDlhvigle-dsfeqlDSQDC 187 elephant shark
Feature 1         #      #  ##  #                                                                
O14804       193 QLl-LNKFWGWLNFPLFFVPCLIMISLYVKIFVVAtrqaqqitt-------------------lskslagaaKHERKAAK 252 human
AAC82382     189 LFfvSTWLVSVVGVCPYVLSLLTMSYVYARIYIVArrqgrqissvslqvhaqqqqqqqqaeptnirqkwtamKREHSAAK 268 European river ...
AAC82381     189 SVfmNVPFGLANSMGAYVLPMLFIMAAYSRIYVMArnqakrisslgdqvra------snasdltmqskwnamKRDHNATK 262 European river ...
AAC82383     189 VFsvSFGILVTIGMGPYFTAIHVVLLMYAVIYRVArrqsrkvaa--------------------dssavknmKREHSAAK 248 European river ...
XP_006626542 192 VLfyNALWGSLDTLIAFFLPCCIMVGLYTKIFFIArkhvvqigtkt----------------dqekkdrfseKSEWKAAK 255 spotted gar
XP_006013505 192 ILlyNELWRTLDSLLAFFIPCSVMIGLYTKVFIVArrharfvnciaek------------nsslnikgkfsrNKETKAAK 259 coelacanth
XP_002935532 180 LFvvNQIYSVCASLIAFYCPMIIMLVAYCRIYRAArnqalrihamernvss------gnasdgpmkkrkyslKRERKAAK 253 western clawed ...
CDQ64394     190 NLflNALWGALDTLIAFFFPCSVMVGLYTKIFLVAkehlrkiedrqn-------------nsneggrgvvsqRSERKAAK 256 rainbow trout
XP_006626543 155 IIvfNAVWGTLDTVFTFFLPCCVMLSIYTKIFSVArrhekvictiqdq-----------iqsrehkkmkiprSKDSKATK 223 spotted gar
XP_007903758 188 VFvvNIPYSVTASIIAFYLPMPVILVAYAKIFLVAtnqvreiaarqqg------------mnlemiqqnssiRKERKAAK 255 elephant shark
Feature 1                    #  ##  #              #   #   #                     
O14804       253 TLGIAVGIYLLCWLPFTIDTMVDsllhfitPPLVFDIFIWFAYFNSACNPIIYVFSYqwFRKAL 316 human
AAC82382     269 TLGSIIGVYLLSWLPFYMVVLFFpnf--qnSSAAVRITTWIGYISSAINPVLYATLNrpFRSAF 330 European river lamprey
AAC82381     263 TLGMIMVVLFIVWLPFIVVVATEpvigyrmDSTVWDVANWFTYFNSRMNPILFASFNnsFRSAF 326 European river lamprey
AAC82383     249 TLGAIIGTFMLSWLPYYVVAMMSftv--dgLFIPYRVAMWIGYCSSAINPLLYASFNrpFRTAF 310 European river lamprey
XP_006626542 256 TLGIVVGVFILCWMPFFVNSIIDpftnfstPAILFELFVWLGYFNSTLNPIIYAFFYpwFQKSL 319 spotted gar
XP_006013505 260 TLGIVMGVFVLCWLPFFLNSIIDphigfstPEKVFDTLLWLGYFNSTFNPIIYAFFYpwFQKAL 323 coelacanth
XP_002935532 254 TLGVIMGLFLLFWTPFFTANIVDpligykmGTVEWEVCLWLGYVNSALNPFLYGLFHksYRRAF 317 western clawed frog
CDQ64394     257 TLGIVVGVFIFCWLPFFVNSIVDpytnfstPPILFEVFIWLGYFNSTANPIIYALFYpwFRKCL 320 rainbow trout
XP_006626543 224 TLTIVIGVFVICWLPYFVNSVMDpflnfstAPAVVDALQWLGYFNSGCNPIIYALFYpwFQKAL 287 spotted gar
XP_007903758 256 TLGIIIGCFLLCWVPFFTLNIIDpllgyqaDSILIEVFLWLGYLNSGLNPFLYAFFNksFRRAF 319 elephant shark

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