1A5D,2M3U,2JDF


Conserved Protein Domain Family
Crystall

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pfam00030: Crystall (this model, PSSM-Id:333781 is obsolete and has been replaced by 459639)
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Beta/Gamma crystallin
The alignment comprises two Greek key motifs since the similarity between them is very low.
Statistics
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PSSM-Id: 333781
Aligned: 102 rows
Threshold Bit Score: 51.7351
Created: 13-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1A5D_A   88 RIRIYEREDYRGQMVEIT-DDC--PHLQDRFHFSD-FHSFHVMEGYW-VLYEMPNYRGRQYLLR--PGEYRRYHDW-GAM 159  Norway rat
Q9A9G5   59 GIVLFEHRDFYGDARPIR-GDM--PDLARIGFNDR-VSSMRISRGAW-QFCEHAYFQGRCWVYDydVGVLPNRQ------ 127  Caulobacter vibrioides
Q0C669   41 GITLYSDTNLRGNAVELT-ADQ--PNFNTVRFNDQ-ARSIEVRGGVW-MVCADGNYKGQCEYID---RSVRNLGEi--GL 110  Hyphomonas neptuniu...
Q0ANJ3   26 TIILYEDTGFRGREVRVT-GDV--RNLDSVRFNDR-ASSFRIVSGEW-ELCQHDDYNGTCELHG--SDQASMGRM----- 93   Maricaulis maris MCS10
Q9A9G4  105 DILMFEDTGYQGRVYEVV-GDT--PDLDIARFNDR-ASSIRIVRGQW-EICEHANYQGRCSRLD--ADQFVLPREW---- 173  Caulobacter vibrioides
Q1D196   92 RARFFYKEQFDGKEVDLPpGQYtqAELERYGIDNNtISSVKPE-GLKvVLFKNDNFSAGDTLSV--TSNAPSLGA----M 164  Myxococcus xanthus ...
Q1D196    3 NITVFYNEDFGGKQVDLKpDEYkrDKLEALGIENNtISSVKVPPGVKaILYKNDDFTGDQIEVV---ANAEELGP----L 75   Myxococcus xanthus ...
Q80W49  788 SISLFALEHCEGRELHLE-DAV--NSVLNKDLHFY-TQSVWIKSGLW-IAYEGSNFLGRQILLT--PKEIPNWTAFsG-- 858  house mouse
Q8N1P7  399 SIFLYGLECFEGKEIELS-REV--RSLQAEGFNNH-VLSVRIKGGIW-VLCEHSDFRGRQWLVG--SCEITNWLTYsG-- 469  human
Q5RGY5  375 SVVLFERCGLRGRRTLLK-CSS--VNLQLTDSCTR-VCSVLVEGGMW-VLYEANNFRGSQILLK--PGAIPDWHKF-S-S 445  zebrafish
1A5D_A  160 NARVGSLRRI 169  Norway rat
Q9A9G5  128 NDRFSSVRRV 137  Caulobacter vibrioides
Q0C669  111 SGAISSAKRV 120  Hyphomonas neptunium ATCC 15444
Q0ANJ3   94 NDQLTSLRPV 103  Maricaulis maris MCS10
Q9A9G4  174 NDAISSIRRV 183  Caulobacter vibrioides
Q1D196  165 NNNTSSIRIT 174  Myxococcus xanthus DK 1622
Q1D196   76 NNNVSSIKVM 85   Myxococcus xanthus DK 1622
Q80W49  859 WKTIGSVRPM 868  house mouse
Q8N1P7  470 TQRVGSLYPI 479  human
Q5RGY5  446 WQRIGSLRPL 455  zebrafish
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