3HZJ


Conserved Protein Domain Family
RabGAP-TBC

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pfam00566: RabGAP-TBC (this model, PSSM-Id:334148 is obsolete and has been replaced by 459855)
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Rab-GTPase-TBC domain
Identification of a TBC domain in GYP6_YEAST and GYP7_YEAST, which are GTPase activator proteins of yeast Ypt6 and Ypt7, implies that these domains are GTPase activator proteins of Rab-like small GTPases.
Statistics
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PSSM-Id: 334148
Aligned: 73 rows
Threshold Bit Score: 74.9926
Created: 14-Mar-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3HZJ_A         36 EALRAEVWQLLAgchdnqaxldry-----------------rilitkdsaqeSVIT-RDIHRTFP-AH---DYfKDtgG- 92   human
Q4DAN6        309 LVSDARTWLHksaqksmgvsvds----------------sfsllypnmvfpmHAVN-GDGNNLFL------SSlLN--E- 362  Trypanosoma c...
Q09844        218 SRVRGRVWEKAIgnnlkldyqsffnaranaqkreaaekaeqmnnanqfredvCALE-LDLQSTMPhYS---LFhTE--G- 290  Schizosacchar...
Q5CZH0        512 DFARRTLWPIIIgnnlkireely------------------aifvrkttniqEAIR-GDIIRAKQ--Q---YPfIT--D- 564  Paramecium te...
A0DT74         86 ISARKQIWPLIVgnklqitkelynilqtqs-----ktfkfdqrkplgrmssfNHIK-QDLGRTFKnESlqkIFhPG--G- 156  Paramecium te...
Q23QD2        378 QSLRKRVWPYLIgnklrinkklyknl------------enqmnahqvcqktaNLIR-EDMHRTYP-NF---SLfDK--Gs 438  Tetrahymena t...
A0EBU5        239 EQHRGKIWSFLIgnqlqinkqlyekll-----------lsipnhplitnelkNLIN-NDLQRTFTii---nDFeNS--D- 300  Paramecium te...
Q54UM5        459 SLVRSKVWPLLIgndlnitpelfsifgara----erakqksearslgrektvSLIH-LDLPRTFPmLS---IFqDE--G- 527  Dictyostelium...
Q54IZ7        293 DKKRNLVWKAIIgtneadqthcynsayss------sfgdesdpnirnipafgGLFSpSDHLITEQ--------------- 351  Dictyostelium...
XP_001470761 1206 kwVRKTIWPLSIgnrleitenlykillkqv----qvsennigiannqimisiEKMK-ADLSNRSG-KRf--FSqFN--A- 1274 Tetrahymena t...
3HZJ_A         93 DGQESLYKICKAYSVYDEDIGYC-QGQSFLAAVLL-L-HX-PEEqAFCVLVKIXy-dYGLRDLYRNNFED--LHCKFY-- 163  human
Q4DAN6        363 NAVRRVDSLLQTYMELRPEVVYV-KDMP-CLAMMLsLvIE-DPWeLCVCFTSLLe-yGHLAPFIRSRKEG--ITVHFN-- 434  Trypanosoma c...
Q09844        291 PLRRDLIGLLRAYSYYRFDTSYI-PGTSFIGALLLl--NM-NLTsAFNCLANLLd-kPFLQAVYTQDTSS--LKSFYQ-- 361  Schizosacchar...
Q5CZH0        565 VKAKELSNILHAFSNYRPDFGYI-PDLIDIAVVLIk--HL-QEYdSFQALVNLLh-qYHFLSVFQNDTRQ--IEWRIR-- 635  Paramecium te...
A0DT74        157 PLSENLQSILEVFCLYRPDIGYV-QGMTYVGSILLt--YF-DDYqAFVIFSSLIt-hPQLISIFMLDEQN--LQIIFQ-- 227  Paramecium te...
Q23QD2        439 QINETLQAILEQFNHFRPDIGYV-QGMAYPAAIIF-LyLG-DSYlTFKYFSNLIagsEFISNLYKFKIDK--IKIYVK-- 511  Tetrahymena t...
A0EBU5        301 KLKDDLREILTIFHIYRPDMGYI-QGMTYLAFMFLi--RM-PKQkALKCLANILfksQLLRTFYQFKSHY--LEAYFL-- 372  Paramecium te...
Q54UM5        528 PLHQSLANVLEAYVCYRPDVGYV-QGMSYLAAVFLl--IL-DEFnSFVCLSNFLn-nPCYMTFYTMNLDQ--MAVYMN-- 598  Dictyostelium...
Q54IZ7        352 -GVKQVKSILNLIHTNSH-VEYC-PQISDLVHILIs--FM-SEAnTYTTTSLIL---KDAEENRPHRFLNidKKECAKfv 422  Dictyostelium...
XP_001470761 1275 PQLKMLENVLSAFIFYRPDVGYInEAMPNLAAVLIs--QLdEEYaVFKAFINLLh-sYHFLTFFRGEMSE--IKWRVQ-- 1347 Tetrahymena t...
3HZJ_A        164 -QLERLXQEQLPDLHSH-FSDLNLEAHX-YASQWFLTLFT-AKFPLCXVFHIIDlLLC-EGl-NiIFHVALALL-KTSKE 236  human
Q4DAN6        435 -IFDAVLRKAHSALYGL-FQRYEVPLDV-YLLDWWTTVFL-RTLPVAVALHVWD-LFLld--eHyLYRTTLAILvYRF-- 505  Trypanosoma c...
Q09844        362 -TFLDTLKKNEPELATHlLIKLELVPDD-FVYPLLRKLFIpMVSP-EIASRILDcYVF-EEdsF-FIQLLMAVF-KLLKP 435  Schizosacchar...
Q5CZH0        636 -FFEENLQRILPFVYNH-LKAIKLETKL-YLMKWFLKIFL-HQFKFPMLSRLWDnFLL-EGe-IyLFKVGICYL-KYFQI 708  Paramecium te...
A0DT74        228 -QFEKLIKLNIPQVHKL-FKQYNINCTN-YLLDWILTLFA-KPLNPDIVGRIWDrMLF-NGt-HiLWKCGIAIL-KILYP 300  Paramecium te...
Q23QD2        512 -TFEYFLSQKYPNCLKH-LQKLHIQSDI-FLIEWFYTLYC-RAFSFSTIAKIWD-LMLaHGe-ViFYKVGISIF-GCIEK 584  Tetrahymena t...
A0EBU5        373 -LFDSFFQEKLPVLANK-FNQINLPKQS-FLVEWFYTVFS-RAFNLITSSKVWDyFLC-EGd-LfLIRLTLAVL-SNLEP 445  Paramecium te...
Q54UM5        599 -TMDQLMAQNLPKIQKH-LKELGIQPDI-FMIDWVLTVFS-KALPLDVASHVWDtIFL-DGe-VvIFQTALGIL-KMYSK 671  Dictyostelium...
Q54IZ7        423 hSFDHLIELHLPKLHRH-MITIGLTNSFvFSDEWFSRLFV-SFLPYNTVLRIFD-ILLnEGykV-LYRIGLALL-KTHKK 497  Dictyostelium...
XP_001470761 1348 -FFNEYLQKRMHLVLQH-FKALDLSSEL-FVMHWFLNLFS-NVFDQETVLRIWDnFLL-EGe-VfAYKAGIAFI-EYFHl 1420 Tetrahymena t...
3HZJ_A        237 DLL 239  human
Q4DAN6        506 GLY 508  Trypanosoma cruzi
Q09844        436 KLL 438  Schizosaccharomyces pombe 972h-
Q5CZH0        709 ELK 711  Paramecium tetraurelia
A0DT74        301 KFK 303  Paramecium tetraurelia
Q23QD2        585 DLi 587  Tetrahymena thermophila SB210
A0EBU5        446 ELL 448  Paramecium tetraurelia
Q54UM5        672 DLE 674  Dictyostelium discoideum AX4
Q54IZ7        498 QLK 500  Dictyostelium discoideum AX4
XP_001470761 1421 efk 1423 Tetrahymena thermophila SB210
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