4I6P


Conserved Protein Domain Family
DUF3534

?
pfam12053: DUF3534 (this model, PSSM-Id:338230 is obsolete and has been replaced by 463446)
Click on image for an interactive view with Cn3D
N-terminal of Par3 and HAL proteins
This presumed domain is functionally uncharacterized. This domain is found in eukaryotes. This domain is about 150 amino acids in length. This eukaryotic domain is found associated with pfam00595. It has a conserved GILD sequence motif. Family members have been found to be essential for cell polarity establishment and maintenance such as Par3 (partitioning defective) and involved in conversion of histidine into ammonia (a crucial step for forming histamine in humans) such as Histidine ammonia lyase (HAL). This N-terminal domain is found to mediate oligomerization critical for the membrane localization of Par-3. It is also found to possess a self-association capacity via a front-to-back mode in Par-3 and HAL proteins. However, unlike the Par-3 N-terminal domain which self-assembles into a left-handed helical filament, the HAL N-terminal domain does not tend to form a helical filament but rather self-assembles into circular oligomeric particles. This has been suggested to be likely due to the absence of equivalent charged residues that are essential for the longitudinal packing of the Par-3 N-terminal domain filament.
Statistics
?
PSSM-Id: 338230
Aligned: 15 rows
Threshold Bit Score: 121.644
Created: 13-May-2019
Updated: 18-Jul-2019
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4I6P_A          7 KVTVCFGRTRVVVPCGDGRMKVFSLIQQAVTRYRKAVAKDPNYWIQVHRLEH-GDGGILDLDDILCDVADDKDRLVAVFD 85   Norway rat
XP_015215079    2 KVTVNFGKTGVVVPCKDG-WTVRDLIQQATQRYMKLLEQDGSCFVKIHHLEY-SDGGILDPDDILADLVDDKDKLIALYE 79   spotted gar
EEB13777        2 KVTVCFGPVRVVVPCGDGFITVRDLIRQATLRYKKATGKGADSWVVVQSLQT-SDGGILDPDDRLNDVADDREQIVATFS 80   human body louse
EDV26758        2 KITVIFGEIRILVPCSSGDLRISDLIKKAVDRYRKVTKKLPGEGVYVRSVEDaKDHAILDDDDLVNEVLDDRDMVIANYE 81   Trichoplax ad...
Q29HU6          2 KVTVCFGDVRILVPCGSGELLVSELVKEATRRYIKAAGK-PDSWVTVTHLQT-QS-GILDPDDCVRDVADDREQILAHFE 78   Drosophila ps...
EFZ19152        2 KVTVCFDNVRVVVPCGDGTLLVKDLMHEAILRYKKATGK-SDNTLTINSLSSlTGGGLLDPDDRLCDVADDREQIVAHFA 80   red fire ant
XP_001943183    2 KVTVCFGSTRVIVPCGRGEILVRDLIQQAITRYKKATGKSSNSWVTVHSLQSqSDGGILDPDDRLRDVADDREQIVALYD 81   pea aphid
XP_021331539    2 KVTVIFGETRVVVPCKDS-WMVRDLIDQATQRYKKIVEQDGEFLVRTLHVEY-VDGGILDPDDMLSDLVEDKEKLTAVFE 79   zebrafish
XP_011604405    2 KVTVTFGDTSVVVPCKSG-WTVRDLIDQATRRYRRILEQHGESAVKTHHLEY-AEGGILDMDDMLSDLVEDRDKLVAIFD 79   torafugu
XP_021026274    2 KVTVCFGRTRVVVPCGDGRMKVFSLIQQAVTRYRKAVAKDPNYWIQVHRLEH-GDGGILDLDDILCDVADDKDRLVAVFD 80   Ryukyu mouse
4I6P_A         86 EQD 88   Norway rat
XP_015215079   80 EQE 82   spotted gar
EEB13777       81 DGD 83   human body louse
EDV26758       82 EDR 84   Trichoplax adhaerens
Q29HU6         79 DPG 81   Drosophila pseudoobscura
EFZ19152       81 SSD 83   red fire ant
XP_001943183   82 DGD 84   pea aphid
XP_021331539   80 KLE 82   zebrafish
XP_011604405   80 EVH 82   torafugu
XP_021026274   81 EQD 83   Ryukyu mouse
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap