1T2A,1N7G,1RPN,4EGB,1KVS


Conserved Protein Domain Family
GDP_Man_Dehyd

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pfam16363: GDP_Man_Dehyd (this model, PSSM-Id:339714 is obsolete and has been replaced by 465104)
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GDP-mannose 4,6 dehydratase
Statistics
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PSSM-Id: 339714
Aligned: 265 rows
Threshold Bit Score: 211.63
Created: 16-Apr-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1T2A_A        28 LITGITGQDGSY-LAEFLL-EK--GYEVHGIVR--RSSSFNTGRIEHLYKNpqAHIEGNMKLHYGDLTD-STCLVKIINE 100 human
Q4CYB9        25 LVTGGLGFIGSN-FINHLL-RThsGVHVYNLDKvdYCSSFR--SIEN-PSDpyYH------FVRGNITN-ADLVMYVLRH 92  Trypanosoma cruzi
ERG84349       8 LVTGGCGFIGSN-FINYIF-HV--WPDVHFVNC--DKLIL---NSDACYVDeeVRSSERYQLVTADIRN-SEVVRRILNE 77  pig roundworm
EDK41767      20 LVTGGAGFIGSH-TLDYLV-QK--YPDCKFTCV--DKLSYATNYSENNLRKvsGC--DNFTFIKLDLAEeHQRLDELINH 91  Meyerozyma guil...
WP_012319347   4 LVTGGCGFIGSA-LVLHLVnDL--GHDVCTLDA--MTYAANPVSLAPLADNprH------RLVEADICD-RAAVQKAYAD 71  eubacteria
WP_006249515   4 LITGGAGFIGSA-LVRYLI-EH----TPHTVIN--VDKLTYAGNLASLESVa---hHERYHFEKADICA-SGQISEIFGK 71  Mannheimia haem...
WP_005547278   6 LVTGGAGFIGSA-VVRYII-EN--TQDS--VVN--VDKLTYAGNLESLET---VKNNPRYIFEQVDICD-AKALARIFEQ 73  Aggregatibacter...
WP_050764216   5 LVTGGAGFIGSA-VVRHLI-EDt-PHEVCVLDK--LTYAGNLDNLEPVAKNprYRF------KQVDICD-RAAVATLIAS 72  Beijerinckia in...
WP_013031028   5 LVTGGAGFIGSAvIRQFIN-DT--ACSVVNVDK--LTYAGNLQSLASVSDNprYRFE------QVDICD-AAEVARVFRE 72  Sideroxydans li...
CBE69853       4 LVTGGAGFIGSN-FIRHLL-AT--ESACH-VVN--LDKLTYAGNLENLTD---VEHDPRYRFVKGSICD-ALLVDELLKE 72  Candidatus Meth...
1T2A_A       101 V--KPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVK----TC-----G--LI------N-----SVKFYQAST 156 human
Q4CYB9        93 H--DIDTIINFAAQSHVDNSFGNSLSFTYNNVLGTHVLLECAR----TY-----G--RI------E-------KFIHVST 146 Trypanosoma cruzi
ERG84349      78 N--KIDTVVHFAADCTSTRCYGDPIESVENNVIAFIKLLDAVR----EY-----G--AV-------------KRFIHIST 131 pig roundworm
EDK41767      92 SanNFTTIINFAAESCVDKSFNDPLYFTKNNVLATQNLLECCR----TLlnskpN--LR------R-----NFKFIHIST 154 Meyerozyma guil...
WP_012319347  72 F--KPEAVMHLAAESHVDRSITDPGAFVRTNVIGTQTMLDGARghyeTLp---eA--EK------R-----TFRFLHVST 133 eubacteria
WP_006249515  72 Y--QPDVVMHLAAESHVDRSISGAADFIQTNIVGTYTLLEAAR----AY-----W--DTlpeprkS-----AFRFLHIST 133 Mannheimia haem...
WP_005547278  74 H--QPDVVMHLAAESHVDRSIDGPAAFIETNIVGTYILLEAAR----AY-----W--SSlndekkA-----GFRFHHIST 135 Aggregatibacter...
WP_050764216  73 Y--QPRIIMHLAAESHVDRSIDGPAAFIETNLVGTFTLLEAAR----CF-----WqdLP------Gee-kaAFRFHHVST 134 Beijerinckia in...
WP_013031028  73 H--QPDAVMHLAAESHVDRSISGPADFIQTNIIGTYTLLEAAR----GYw----N--SL------DgerkaGFRFHHIST 134 Sideroxydans li...
CBE69853      73 G--F-DALINFAAESHVDRSIQDARAFTETNVLGTQVMLDACR----R----------H------R-----VPRMMQVST 124 Candidatus Meth...
1T2A_A       157 SELYGKVQ----EIP-Q-KETTPFYPRSPYGAAKLYAYWIVVNFREAYNL----FAVNGILFN----------------- 209 human
Q4CYB9       147 DEVYGQVT----DSK-K-EE-GTLNPTNPYAATKAAVEYIVKSYHISFGL----PCIIT---R----------------- 195 Trypanosoma cruzi
ERG84349     132 DEVYGDSDlsedEKG-K-LEDSLLLPGNPYAATKAACESYAHMYRQQFGI----PIVILRINNiygpnqwdvkaccycyc 205 pig roundworm
EDK41767     155 DEVYGEQK----EGEiI-DEDGPLHPTNPYAASKAACDLIIEAYKHSYKIpitlIRSNNVYGP----------------- 212 Meyerozyma guil...
WP_012319347 134 DEVYGSLPp---DAF-F-TEESRYDPRSPYSASKAASDHLARAWHETYGL----PVLVTNCSN----------------- 187 eubacteria
WP_006249515 134 DEVYGDLAk--sEEL-F-TEKTPYNPSSPYSASKAASDHLARAWHRTYGL----PTVITNCSN----------------- 188 Mannheimia haem...
WP_005547278 136 DEVYGDLDg--tKNL-F-TETTPYSPSSPYSASKASSDHLVRAWLRTYSL----PTIVTNCSN----------------- 190 Aggregatibacter...
WP_050764216 135 DEVFGSLGa---DGF-F-QETTAYQPNSPYSASKAGSDHLVRAWGHTYGL----PTVTSNCSN----------------- 188 Beijerinckia in...
WP_013031028 135 DEVYGSLG----DTGfF-TEETAYEPNSPYSASKASSDHLVRAWHHTYGF----PVVTTNCSN----------------- 188 Sideroxydans li...
CBE69853     125 DEVYGSLG----AFG-RfTEESPLHSNSPYAASKAAGDLLALAYCRTYGL----PVIITRSSN----------------- 178 Candidatus Meth...
1T2A_A       210 --HESPRRGANF--------VTRKISRSVAKIYLGQ-LECFSL-GNLDAKRDWGHAKDYVEA---MWLMLQN--DEPEDF 272 human
Q4CYB9       196 --GNNVYGPYQY--------PEKLIPRFIMLMNAGK-K-LTIQ-GNGSNKRTFIHASDVARA---FVAIINH------GF 253 Trypanosoma cruzi
ERG84349     206 fcHYSWS----LepsqfksnVFEVVPRFI-EIAKNR-ENFTIQ-GSGKQLRSWLYADDASEG---IRAAVER--G----- 268 pig roundworm
EDK41767     213 --RQFPEKIIP---------VCLKALQKASPTGIAE-KERIPIhGNGRHTRRYLHVLDFAKAvdhIWNWLKNtsESSSDF 280 Meyerozyma guil...
WP_012319347 188 --NYGPR---HF--------PEKLIPLMILNALEGKkLPVY---GDGLNERDWIHVEDHAKG---LVAVLER--GRIGET 246 eubacteria
WP_006249515 189 --NYGAYQ---Y--------PEKLIPLMILNALEGK--SLPVY-GNGLQVRDWLFVEDHIRA---LYLVLQK--GQ---- 243 Mannheimia haem...
WP_005547278 191 --NYGPF---HF--------PEKLIPLIILNALDGK--PLPVY-GNGQQIRDWLFVEDHARA---LYKVVTE--GK---- 245 Aggregatibacter...
WP_050764216 189 --NYGPY---HF--------PEKLIPLMILNALEGK-P-LPVY-GNGQNIRDWLYVEDHARA---LVAIALA--GRP--- 244 Beijerinckia in...
WP_013031028 189 --NYGPY---HF--------PEKLIPLVILNAVNGKpLPI--Y-GKGDNIRDWLYVDDHARA---LRLVLER--GK---- 243 Sideroxydans li...
CBE69853     179 --NYGPHQ---F--------PEKVIPLFITNALVGEpLPLY---GDGLHIRDWLHVRDHCEA---LALILNN--G----- 232 Candidatus Meth...
1T2A_A       273 VIATGEVHSVREFVEKSFLHIGKTIVWE-GK--NENEVGRCKETGKVHV-T-VDLKYYRPTEVDFL-QGDCTKAK-QKLN 345 human
Q4CYB9       254 I---GDVYNIGSCDEKSVLDIARMTVKY-VRahKCGEREPLADPSEEEV-S-RHLVFVKDREFNDE-RYDISVEKlQELG 326 Trypanosoma cruzi
ERG84349     269 --AVGEIYNLGTYFELNMLDVAREVQVE-----VDKQLGRE--PSP--V-H-FVSIPDRPYNDLRY-LIDITKAY-DELG 333 pig roundworm
EDK41767     281 LGETFNVGTDDEVDNLSMVKLICTIFMR-KK--F--GVESLDASSFIRH-T-KDRNYN-----DFRySIDFTKIK--KVG 346 Meyerozyma guil...
WP_012319347 247 YLLGGR-------AVRNNLAVVKALCAA---------FDRLRPQGAPHEqL-ISFVADRPGHDRRY-AIDCTKAE-TELG 307 eubacteria
WP_006249515 244 ---IGETYNIGGHNEKTNIEVVRSICSI--L--QEMVPNNPLVVGQYAD-L-ITYVQDRPGHDFRY-AIDTSKIE-KELD 312 Mannheimia haem...
WP_005547278 246 ---IGETYNIGGHNEKANIDVVRTICAL--L--EELVPNKPAGVTKYED-L-ITYVKDRPGHDVRY-AIDATKIS-RELG 314 Aggregatibacter...
WP_050764216 245 ----GESYNVGGWNERANIDVVQAVCA------LVDEMAPDAAIGPREK-L-ITFVTDRPGHDARY-AIDATKIK-QDLG 310 Beijerinckia in...
WP_013031028 244 ---LGETYNIGGWNEKTNLEVVLAICA--AL--DEL-----RPQGAPHN-KlITYVADRPGHDKRY-AIDATKLA-RDLG 308 Sideroxydans li...
CBE69853     233 --VSGEIYNIGGRCERANIDVARFILRTlGK--PDTL--------IAHV-K-DRLGHDRRYAL------DASKLE-QALG 291 Candidatus Meth...
1T2A_A       346 WKPRVAFDELVREM 359 human
Q4CYB9       327 WRQEVRFEEGYKET 340 Trypanosoma cruzi
ERG84349     334 WSPKIPFNEGIRRv 347 pig roundworm
EDK41767     347 WKQEISLEQGIEEL 360 Meyerozyma guilliermondii ATCC 6260
WP_012319347 308 WRPQKTFEQALEET 321 eubacteria
WP_006249515 313 WKPKETFESGLRKT 326 Mannheimia haemolytica
WP_005547278 315 WKPQETFESGIRKT 328 Aggregatibacter actinomycetemcomitans
WP_050764216 311 WTPRETFETGLRKT 324 Beijerinckia indica
WP_013031028 309 WKPQETFETGLRKT 322 Sideroxydans lithotrophicus
CBE69853     292 WSPRIAFEAGLEET 305 Candidatus Methylomirabilis oxyfera
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