1VX7,3IZS,3ZF7


Conserved Protein Domain Family
Ribosomal_L18

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pfam17135: Ribosomal_L18 (this model, PSSM-Id:339899 is obsolete and has been replaced by 465358)
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Ribosomal protein 60S L18 and 50S L18e
This is a family of ribosomal proteins, 60S L18 from eukaryotes and 50S L18e from Archaea.
Statistics
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PSSM-Id: 339899
Aligned: 78 rows
Threshold Bit Score: 226.656
Created: 7-Apr-2017
Updated: 23-May-2017
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1VX7_S         2 GIALK--NVgri--kkhGRKHLV----SKNPYLRLLVKLYNFLARRTNANFNKIIAKRLIMPKRYRPPLSLSKLQYHMA- 72  Plasmodium falc...
P50885         2 GVDLT--GVq------kKKRVVRhhtySTNPYIKLLIKLYKFLGKRTNSPFNKLIHKRLLKSRNNRAPISLSRIAVCMR- 72  Trypanosoma bru...
XP_001611595   2 GIDLE--KGgrv--kkpGRKALV----SQDPYLQLLVNSYKLLARRTQSKFNRTILKRLIMPRRFKCPMSLSKLTKHMKg 73  Babesia bovis T2Bo
XP_004363125  28 aIDRS--HRfer---ksGRKFLV----SKNPYMALLVKLYRFLSRRTGSKFNRIVLKRLITTRVNKMAVSLSRVANLMK- 97  Dictyostelium f...
3ZF7_I         2 GVDLT--GVqkk--krvVRHHTY----STNPYIKLLIKLYKFLGKRTNSPFNKLIHKRLLKSRNNRAPISLSRIAVCMRr 73  Trypanosoma bru...
XP_002679583   2 GIDKKylAKthe--kksVRKNLV----SPNVYLSILVKLYKLLARRTGAEFNKKVLARMLHTRREQRPVTLARLTKLVg- 74  Naegleria grube...
XP_002184066   2 GIDLK--AGgrrvghssSMKAVK----SQNPYNKLLIKLYKFLDRRTDSKFCGTVLKRLHMSKVNQPPMGLHRLSKYMA- 74  Phaeodactylum t...
XP_020433194   2 AVDRS--HRf-------ARKTGRktlvSKNPYLSLLVKLYKFLARRTGSKFNKIVLRRLIQTRSNKIAVSISRIANAMK- 71  Polysphondylium...
XP_002140933   2 GIDLK--AGgri--kktQSKKSR----STNPYRALLVKLYRFLARRTDSAFNSTVLRRLMMARRFQAPISVSRLLSLMH- 72  Cryptosporidium...
XP_001563181   2 GVDLT--GIs------kKSRVVRhhtySTNPYIKLLIKLYKFLAKRTSSGFNKVVYQRLIKSRSNRAPISLSRIAVVMK- 72  Leishmania braz...
1VX7_S        73 -----NHp------nD--IAVVVGSITDDkRLFSLKQ-LKVCALRFTETARKRIEDAGGECLTFDQLALKYPTGKKCVLL 138 Plasmodium falc...
P50885        73 -----RRtvwlkkgkKspIAVIVGDVLDDvRMTRIPA-LRICALRFSKSARERITGAGGECLTFDQLAMMAPTGKNTMLL 146 Trypanosoma bru...
XP_001611595  74 --------------rEhtTAVIVGTITDDiRVTEVPK-LSVCALRVTEKARARLLKAGGEIITFDELISRAPTGTNCTLL 138 Babesia bovis T2Bo
XP_004363125  98 -----DRk-------AgkIAVIVGPVVDDeRLIETPK-LTICALKFSEAVRARIVKAGGKCLTFDQLALLRPRGNNTFLI 164 Dictyostelium f...
3ZF7_I        74 rtvwlKKg------kKspIAVIVGDVLDDvRMTRIPA-LRICALRFSKSARERITGAGGECLTFDQLAMMAPTGKNTMLL 146 Trypanosoma bru...
XP_002679583  75 --------------eKkeVAVVVGTITNDaRLLDAPKgLKVCALHVTETARKRIVENGGQVLTFDQLAQISPDGKGCVLL 140 Naegleria grube...
XP_002184066  75 -----QK--------EgkTAVIVGKVTDDvRMLECPK-MSVCALAFTENARKRIVASGGECITLDQLALRAPKGSNTVLL 140 Phaeodactylum t...
XP_020433194  72 -----DRk-------AgkIAVVVGSVVNDeRLLDVPA-LTVVALKFSESVRARIVKAGGKALTFDQFALIRPRGNNTFLL 138 Polysphondylium...
XP_002140933  73 -----GK--------EgkIAVVVGTVTDDvRVLKLPK-MSVCALRFTENARRHIEKCGGECLTFDQLALRAPTGSNVILL 138 Cryptosporidium...
XP_001563181  73 -----RKavftakckKapIAVVVGDVLDDvRMARIPA-MRVCALRFSKNARQSIVAAGGECLTFDQLAMIAPTGKNTYLM 146 Leishmania braz...
1VX7_S       139 RGPTKARTAEKHFGk--APGKPKSK--ARPY----VRSKGRKFEKARg-----RRKsrAYKK 187 Plasmodium falciparum 3D7
P50885       147 RGRKSGRESVKHFG---AAGVPGSH--AKPH----VSSRGKERQRSs-----kRRH--AFRH 192 Trypanosoma brucei brucei TREU927
XP_001611595 139 RGPTKAREAEKHFGr--APGTPGSS--TKPY----VRSKGRKFEKARg-----RRKscGFKV 187 Babesia bovis T2Bo
XP_004363125 165 KGAVKGRTAYKYFGr--AAGLPGSH--TRTR----TLQKGNKFERARtfgkkkclkskvkkr 218 Dictyostelium fasciculatum
3ZF7_I       147 RGRKSGRESVKHFG---AAGVPGSH--AKPH----VSSRGKERQRSSk-----RRHafRHK- 193 Trypanosoma brucei TREU927
XP_002679583 141 RGNKNT-EAKKHFGl--APGQAGSH--AKPYkhgsTKREGRYGELGRg-----RRAsrQYKK 192 Naegleria gruberi strain NEG-M
XP_002184066 141 RGP-KSREALAHFGhstSVNNPHTHtgVKPY----VRSKGRKFEKARg-----RRRsrGFKV 192 Phaeodactylum tricornutum CCAP 10...
XP_020433194 139 KGVVKARTVYKHFGr--APGLPGST--ARPY----VRAQGRKFEQARt---------fANTK 183 Polysphondylium pallidum PN500
XP_002140933 139 RGPTKSRKQEKFFGk--APGLPKST--SRPR----VHSKGRKFEKARg-----RRAsrAYKA 187 Cryptosporidium muris RN66
XP_001563181 147 RGRKSGRESVRHFG---ASGVPGSH--SKPY----ATNRGKETKRGRrpgqsyKRK--AFRH 197 Leishmania braziliensis MHOM/BR/7...
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