Conserved Protein Domain Family
FERM_F1_FRMD4B

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cd17200: FERM_F1_FRMD4B 
FERM (Four.1 protein, Ezrin, Radixin, Moesin) domain, F1 sub-domain, found in FERM domain-containing protein 4B (FRMD4B)
FRMD4B, also termed GRP1-binding protein GRSP1, interacts with the coil-coil domain of ARF exchange factor GRP1 to form the Grsp1-Grp1 complex that co-localizes with cortical actin rich regions in response to stimulation of CHO-T cells with insulin or epidermal growth factor (EGF). FRMD4B contains a FERM protein interaction domain as well as two coiled coil domains and may therefore function as a scaffolding protein. The FERM domain is made up of three sub-domains, F1, F2, and F3. This family corresponds to the F1 sub-domain, which is also called the N-terminal ubiquitin-like structural domain of the FERM domain (FERM_N).
Statistics
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PSSM-Id: 340720
Aligned: 6 rows
Threshold Bit Score: 173.536
Created: 20-Jan-2015
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
key conserved
Feature 1: key conserved lysine K11, 1 residue position
Conserved feature residue pattern:[KR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:K11/R (Ub numbering) is one of 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering), the other 6 lysines are not conserved in this subfamily; may have other functions

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                     #                                                                   
Q9Y2L6         57 EGRHCQVHLLDDRRLELLVQPKLLARELLDLVASHFNLKEKEYFGITFIDDTGQQNWLQLDHRVLDHDLpKKPGPTILHF 136  human
KFU89061       57 EGRHCQVHLLDDRNLELLVQPKLLSRELLDLVASHFNLKEKEYFGITFIDDTGQSVWLQLDHRVLDHDLpKKPGPATLYF 136  chimney swift
XP_007893402   57 EGRHCQVNLLDGRKLELLVQPKLLSRELLDLVASHFNLKEKEYFGITFINDTGQSNWLQLDRRVLDHDLpKKAGPVTLFF 136  elephant shark
XP_002940561   57 EGRHCKVHLLDDRELELLVQPKLLSRELLDLVASHFSLKEKEYFGISFLDDTGQYAWLQLDQRVLDHDFpKKSGPVSLYF 136  western clawe...
XP_014343458   57 EGRHCQVILLDDRKLELLVQPKLLSRELLDLVASHFNLKEKEYFGIKYTDDIGQSNWLQLDHRVLDHDLpKKSGPVTMYF 136  coelacanth
KPP77945        5 EGRLCQVHLLDDRKLELLVQPKLLSRELLDLVSSHFNLKEKEYFGITFIDDTGQCKWLQLDRRVLDHDFsKKTGPIALKF 84   Asian bonytongue
Feature 1                  
Q9Y2L6        137 AVRFYIESI 145  human
KFU89061      137 AVRFYIESI 145  chimney swift
XP_007893402  137 SVKFYIESI 145  elephant shark
XP_002940561  137 VVRFYIESI 145  western clawed frog
XP_014343458  137 AVRFYIESI 145  coelacanth
KPP77945       85 LVRFYIESI 93   Asian bonytongue

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