Conserved Protein Domain Family
RA_Myosin-IXa

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cd17216: RA_Myosin-IXa 
Ras-associating (RA) domain found in Myosin-IXa
Myosin-IXa, also termed myosin-9a (Myo9a), is a single-headed, actin-dependent motor protein of the unconventional myosin IX class. It is expressed in several tissues and is enriched in the brain and testes. Myosin-IXa contains a Ras-associating (RA) domain, a motor domain, a protein kinase C conserved region 1 (C1), and a Rho GTPase activating domain (RhoGAP). Its RA domain is located at its head domain and has the beta-grasp ubiquitin-like fold with unknown function. Myosin-IXa binds the alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionic acid receptor (AMPAR) GluA2 subunit, and plays a key role in controlling the molecular structure and function of hippocampal synapses. Moreover, Myosin-IXa functions in epithelial cell morphology and differentiation such that its knockout mice develop hydrocephalus and kidney dysfunction. Myosin-IXa regulates collective epithelial cell migration by targeting RhoGAP activity to cell-cell junctions. Myosin-IXa negatively regulates Rho GTPase signaling, and functions as a regulator of kidney tubule function.
Statistics
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PSSM-Id: 340736
Aligned: 6 rows
Threshold Bit Score: 210.559
Created: 7-Jul-2015
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
key conserved
Feature 1: key conserved lysine K33, 1 residue position
Conserved feature residue pattern:[KR]Click to see conserved feature residue pattern help
Evidence:
  • Comment:K33/R (Ub numbering) is one of 7 lysines involved in chain linkage in ubiquitin (K6, K11, K27, K29, K33, K48, or K63, Ub numbering), the other 6 lysines are not conserved in this subfamily; may have other functions

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                              #                                          
B2RTY4         15 EHTLRIYPGaiseGTIYCPIPARKNSTAAEVIESLINKLHLDKTKCYVLAEVKefGGEEWILNPTDCPVQRMMLWPRMAL 94   human
ETE68352       16 EHTLHIYPGniaeGTIYCPIIARKTSTAAEVIDSLINKLQLDKTKCYVLAEVKefGGEEWILNPTDCPVQRMMLWPRMAL 95   king cobra
XP_007906841   16 ELTLRIYPGniaeGTIYCPVTARKNTSAAEVIEILINKLHLDKTKCYVLAEVKefGGEEWILNPTDCPVQRVMLWPRNAL 95   elephant shark
XP_014346730   16 EFTLRVYPGniaeGTIYCPVTARKNTTAAEVIESLINKLQLDKTKCYVLAEVKefGGEEWILNPTDCPVQRMMLWPRMAL 95   coelacanth
KTF71545       16 EFTLRIYPGviaeGSIYCPIAARKITSAAEVIEQVIDRLQLDRTKCYVLAEVKefGGEEWILNPTDCPVQRMMLWPRMAL 95   common carp
OCT89397       17 EFTLQVYPGsiaqEVIYWPVPARRHTTAADVIDTLITALRLDRAKCYVLAEVKefGGEEWILNPSDCPVQRMMLWPRLAL 96   African clawe...
Feature 1                         
B2RTY4         95 enrlsgedYRFLLREK 110  human
ETE68352       96 enrlsgedYRFLLREK 111  king cobra
XP_007906841   96 enrfssedYRFLLREK 111  elephant shark
XP_014346730   96 enhfsgedYRFLLREK 111  coelacanth
KTF71545       96 enrfssedYRFLLREK 111  common carp
OCT89397       97 eargsgedYRFLLREK 112  African clawed frog

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