Conserved Protein Domain Family
GT4_CapH-like

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cd03812: GT4_CapH-like 
capsular polysaccharide biosynthesis glycosyltransferase CapH and similar proteins
This family is most closely related to the GT4 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Statistics
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PSSM-Id: 340840
Aligned: 18 rows
Threshold Bit Score: 300.745
Created: 15-Dec-2005
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative ADP-binding pocket [chemical binding site]
Evidence:
  • Comment:Some of the residues involved in ADP binding bind indirectly.
  • Comment:Based on similarity to sequences with known structure

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  #                                                                  
AAA64647    3 KVMHIFSrm-nrGGAELRTMDTMKLln---rEFEFHVCATSGKrg-eLDDELESMGITIhy-lDIKKFSFPFKFIKLl-- 74  Staphylococcus aureus
CAH07087    8 EILHIVGtr-pvGGIGALLKNINTSid--lnKFHFTYVFSADSnigdFDNYVRKLGSDIvvfpSYHLKYLFLYLKVIfcf 84  Bacteroides fragil...
CAI33720    3 RILVFGMne-npGGVESFIMNYFREfn--reKLALDFLCNSNDki-aYEDELISKGARVfh-lTARSKNPIRYYWEMyrf 77  Streptococcus pneu...
CAI55815    2 HFISGIKs----GGVEQMLVNYTTQlnknsdYIQYIIYQHEPDk--nSLKKLEEAGNICiq-iPDKMHFPIRNIIWSik- 73  Lactobacillus sake...
YP_536446   3 KILIIGMts-gvGGVETFITNIVDKid--qtKFHIDILLFQEPn--kKYNEVLNKANKVir-iHAINKEPMRYFIDIik- 75  Lactobacillus sali...
CAI33146    2 KILHIPTgglfsDGIGTFIYSYLECmn--ldKWEVTVLATNIPll-eDKAKFENLGIQVvv-lERKKTAIIHYMCQLyk- 76  Streptococcus pneu...
CAI33439   15 KILHIPTgglfsDGIGTFIYSYLEYmd--lsEIEVTILATNKPll-eDKLKFQVLGVQIve-iERKKSSILAYMREFle- 89  Streptococcus pneu...
AAL23734    2 KILQIPTgglfsDGINSFIVEYVTAmd--ksEMDIRVLATNNAee-sTLQRVKESGCEVvs-iPYRKQNIIKYFFKLfr- 76  Streptococcus ther...
AAD50487    4 KILHLVGtl-dvGGIEKWVVNMINYel--enKNELDFYLYSLDp--hKKQIVKQINLDEnsitYTNKKNIFSRMYGFyc- 77  Escherichia coli
EDO58656    5 KILIMVSsftqnNGVTNSIMNNYDEli--ksSKCVDFLVLKNVdt-aNEKKAIRNGSKLyl-iPKADSYISKKKMKFld- 79  Clostridium sp. L2-50
Feature 1                                                                                     
AAA64647   75 ---KKKNIDVVHSHILf-MSGLIQLLSfs-aNVRNRITHFRTSKDskeqynkirkar-nkvlkaiieifsTKILYVSNIA 148 Staphylococcus aureus
CAH07087   85 ykrNAKKYDIIHVHSA--NTGVLDLLFakiyGIRIRILHSHSTKYsskkirsirny----flqfptiylaNTYFACGYKA 158 Bacteroides fragil...
CAI33720   78 fkeYASDYQAIWVNINs-LANIDYLKFaryfGIPVRIVHSHNSQNmdtklreklhn----hnrdkiekwaTDFWACSHEA 152 Streptococcus pneu...
CAI55815   74 -liRKYRPDIVHAHMSl-LNFFPLLAArv-lAVKHRISHSHISRDnvapkfmipv------fkllvrfssNSYLACGKDA 144 Lactobacillus sake...
YP_536446  76 -lyAKENYDIIHLNECs-SKLFIYCWPvifrNNSKLIVHSHNSSDgsiklhkim--------akiqnvvaDKMVACSNEA 145 Lactobacillus sali...
CAI33146   77 -liRANKYDIIHVHGSs-SLMSIELSVakiaGVPVRIAHSHNTTCdhrkldkvl--------rpvfhklyTQAWACGEGA 146 Streptococcus pneu...
CAI33439   90 -llKVGKYDVVHVHGSs-ALMSIELFIakimGVPVRIAHSHNTTCnhilldrml--------rpffytlyTQSWACGEKA 159 Streptococcus pneu...
AAL23734   77 -yiAKEKIDIVHVHGSs-AIMSVELLAaklaGCKVRIAHSHNTICenqrvdq-----------ilrpvfdKLYTECFSCG 143 Streptococcus ther...
AAD50487   78 -lmKKISPDVIHYHPGy-SSGIYLFISki-fFKKINIVHSHSDRRsidrrssifkkiyifimkflinrlsDYKIAVSERA 154 Escherichia coli
EDO58656   80 -eiMGQRYDVVHVNVPnhNGAAVLLSAyk-nKVPVRVYHSHAQKLadtyknkiksf----vfdnlcstlsNAHLACSTAA 153 Clostridium sp. L2-50
Feature 1                                                         ###                         
AAA64647  149 NRNLismk-lfpKKHKTIYNGFEISNINkn------------fkKEENSFIYVGRFIHTKNQLFLLDVIEILKkefntnI 215 Staphylococcus aureus
CAH07087  159 AEFLfgk--krlEKVYIIHNAIFSKKFIynatvrervrvelkieNDCLLLGHIGNFTKEKNHGFLIDILEELLnin-dnV 235 Bacteroides fragil...
CAI33720  153 AKWFyne--etiGKVKIIPNAINMNASIfsseardk-iridytlDNKFVLGHVGRLHFQKNQEFMIRVLAKLQefr-ddV 228 Streptococcus pneu...
CAI55815  145 GTYLyg-----kKNFMVINNAVEIQKYKfskekrrkkrdlygigSDDLIFGNIGRMSPQKNQLFLIEIFSKIIsnc-nnA 218 Lactobacillus sake...
YP_536446 146 AVWMfgeatatsGKVQFIKNGIDLNVYKfeknmrnm-yrkkynlEGKTVLGSVARFERQKNHRRIIDIFEKYHekn-knS 223 Lactobacillus sali...
CAI33146  147 GKWLft-----nREYTIIHNARNIKRYQfseskrqrfrkklslkDTTLALGHVGRFNVQKNHEFLVLLMENLViqg-ldV 220 Streptococcus pneu...
CAI33439  160 GEWLfk-----dKRFKVIHNARDVEKYSfnphlrrvfrtthslkENTLALGHVGRFNIQKNHTFLLDLMDEMKckq-kdV 233 Streptococcus pneu...
AAL23734  144 QEAGkwl--fgnRNFIVIPNGRSLKKYEynqkkrlqyrkklhipDDALVIGHVGRFNEQKNHKYLIQIFYEFHkky-pkS 220 Streptococcus ther...
AAD50487  155 GKSLf------yGSFITHYCGVPDIMLSlpdi--------kkvsSSEFKIYHIGRNSDAKNYPFIFSIAHSLRey--enV 218 Escherichia coli
EDO58656  154 GNEIfg-----iGNFKILPNGIHAEKYVfnkenrnq-ireslglANAVVVGVVGRLSYLKNPFFSVRVFAEFQklv-pdA 226 Clostridium sp. L2-50
Feature 1                                           #                     #                   
AAA64647  216 EITFVGNIQTDYGKkflsianerglNKNIKVIGe-VNNPLDYLKTSEYFLFPSELEGLPGALIEAHHhNCIVISSNIKEN 294 Staphylococcus aureus
CAH07087  236 KLLLVGDGQLRSEIeekvk--lkrlQKYVCFLGr-RTDISELLQAMDFLIFPSFFEGLPVTLIEAQAsGLRCVVSDRITL 312 Bacteroides fragil...
CAI33720  229 CLVLVGQGEDLNKLkilae--elsiQDKVYFVGv-QSNISEWLSTFDLFFFPSNFEGLGIAALEAQVnGLPTLLSEEGVP 305 Streptococcus pneu...
CAI55815  219 KLLIIGNGELEEQLkakvs--elglNNNVIFTGs-VIDTSEYYSMMDVFLLPSLYEGLPIVSIEAQIaGLKCLFSENIDK 295 Lactobacillus sake...
YP_536446 224 VLVLLGEGSKKSEIekyvs--kkslKQNVLFLGn-RVDVVNWLSTFDVLLMPSLYEGLPFIALEAQAcSLPVITSKEISN 300 Lactobacillus sali...
CAI33146  221 KLFLVGEGSTLSKIknmvs--ekslEDRVFFLGh-LNDMKSFVSAMDIMLLPSLYEGLPLVSVEWQInGIQCILSDTITK 297 Streptococcus pneu...
CAI33439  234 KLFLVGEGEKVEDVkryvk--erklEDSIVFLNr-YSDMQSFISAMDIMLLPSLYEGLPLVAIEWQInGIQSILSTTISD 310 Streptococcus pneu...
AAL23734  221 YLVLIGTGDTVTKVkqqvt--elelENYVIFIGa-VNNVPDYLSAFDVMLLPSLYEGLPSVVIEWQIsGLPCLISDNITN 297 Streptococcus ther...
AAD50487  219 HIYCMGAGLELLQKksq-----eenLKNMHFLGfiENPLSHIYIHANVFIMPSLWEGLPLSVVEAQKcNVPCLVSDTITK 293 Escherichia coli
EDO58656  227 RLLWLGAGELDEPVrelak--eleiADKCLFMGs-VGDVEKWYSAMDILLFPSKMEGLGMVAVEAQTsGLFCFASDRVPE 303 Clostridium sp. L2-50
Feature 1                                                               
AAA64647  295 SEVNQyfkDSSFELelipktWASTIKKLISrkkhiSFNDSNVFDInmttQELKEIYMS 352 Staphylococcus aureus
CAH07087  313 ETKITn-nISYLNLnrdpstWAEVVWKLFEdktfiRKDTSKEICEsgydIHLESEYLE 369 Bacteroides fragilis NCTC 9343
CAI33720  306 KEVKIndnTFFYPLkeseesWANFLDEMIHtttrlNYEYIQENFEksgyDIKIAAQNL 363 Streptococcus pneumoniae
CAI55815  296 DVDILs-tTKLIPInqgvdlWIEEALKPDYrisreIIEQMDMYDIkkewHKLDEYYLN 352 Lactobacillus sakei subsp. sakei 23K
YP_536446 301 EVNITt-lVDSIPLensndvWVKKIDNVLLnedvrLDLRNKIKNDfkkkGYSLGDTVN 357 Lactobacillus salivarius subsp. salivari...
CAI33146  298 ECIYTk-qVTSLPIrtp-lyWEKAIRDFCPedrlrQSIENQRLAReagyDIELELVKL 353 Streptococcus pneumoniae
CAI33439  311 ECIFTn-sIQQLPIdnv-stWIKKAIEDFSyinrlEKSRENIDLAqksnYDIRIEAKK 366 Streptococcus pneumoniae
AAL23734  298 ECKITs-lVEFESIettpetWAKDIVELKIedrniNKDKIFKEVRdagyDIDEDAKKL 354 Streptococcus thermophilus
AAD50487  294 ECDIGm--AEFLPLdv--siWQERILNIYKeg-ylMKEVNKSKFSl--eQDILFFKKI 344 Escherichia coli
EDO58656  304 DTKLTe-nIRYYSLnetpleWAQRMMNEKVnwektRTSHLDEINEagynIDSSKITLV 360 Clostridium sp. L2-50

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