Conserved Protein Domain Family
MFS_SLCO1B_OATP1B

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cd17457: MFS_SLCO1B_OATP1B 
Solute carrier organic anion transporter 1B subfamily of the Major Facilitator Superfamily of transporters
The Solute carrier organic anion transporter 1B (SLCO1B), also called organic anion-transporting polypeptide 1B (OATP1B), subfamily is composed of two human proteins, OATP1B1 (encoded by SLCO1B1) and OATP1B3 (encoded by SLCO1B3), and one rodent member, OATP1B2 (encoded by Slco1b2). OATP1B1 and OATP1B3 are almost exclusively expressed on the basal side of hepatocytes in normal human organs. They both can accept a wide variety of structurally-unrelated compounds as substrates including clinically-important drugs such as hydroxymethylglutaryl (HMG)-CoA reductase inhibitors (statins), angiotensin II receptor blockers (sartans), angiotensin converting enzyme (ACE) inhibitors, and anti-diabetes drugs (glinides). Loss-of-function mutations in both SLCO1B1 and SLCO1B3 genes result in the Rotor syndrome, a hereditary hyperbilirubinemia. The SLCO1B/OATP1B subfamily belongs to the Solute carrier organic anion transporter [SLCO, also called organic anion transporting polypeptides (OATPs) or Solute carrier family 21] family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.
Statistics
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PSSM-Id: 341015
Aligned: 3 rows
Threshold Bit Score: 785.572
Created: 21-Mar-2016
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative chemical substrate binding pocket [chemical binding site]
Evidence:
  • Comment:based on the structures of MFS transporters with bound substrates, substrate analogs, and/or inhibitors
  • Comment:since MFS proteins facilitate the transport of many different substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides, the residues involved in substrate binding may not be strictly conserved among superfamily members
  • Comment:the substrate binding site or translocation pore has access to both sides of the membrane in an alternating fashion through a conformational change of the MFS transporter

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                      ##  ##  #                               #                         
Q9Y6L6        27 LKMFLAALSLSFIAKTLGAIIMKSSIIHIErRFEISSSLVGFIDGSFEIGNLLVIVFVSYFGSKlHRPKLIGIGCFIMGI 106 human
NP_001027493  26 LKMFLVALCFSYFAKAFSGSYMKSSITQIErRFDISSSTVGMIDGSFEIGNLMVIAIVSYFGAQfHRPRIIAAGCILMSL 105 western clawed ...
NP_001305378  43 LKVFLAALSFSYFSKALSGVIMKSSITQIErRFDLPSSTVGFIDGSFEMGNLLVIAFVSYFGAKlHRPKVIAAGCFTMAL 122 chicken
Feature 1                                                                                      ##
Q9Y6L6       107 GGVLTALPHFFMGYYRYsketninssenststlstclinqilslnraspeivgkGCLKEsgSYMWIYVFMGNMLRGIGET 186 human
NP_001027493 106 GSFLTAMPHFFMGLYKYetvggptslnsnatin-----vspclanrslvdtpkpDCVTEngSHMWVFLLVGNILRGIGET 180 western clawed ...
NP_001305378 123 GSVLTALPHFFMGYYKYetasdtrssanttssinp--csphqdlnetfldtshsACEKEpsSYMWVYILLGNMLRGIGET 200 chicken
Feature 1         ###  #                   #  ##  #                                              
Q9Y6L6       187 PIVPLGLSYIDDFAKeghsslyLGILNAIAMIGPIIGFTLGSLFSKMYVDIGYVDlstiritptDSRWVGAWWLNFLVSG 266 human
NP_001027493 181 PIAPLGISYLDDFSRpentplhIACLHTVAMFGPMTGFMLGSFLARLYVDIGFVDtdtititpqDTRWVGAWWIGFLLSG 260 western clawed ...
NP_001305378 201 PITPLGISYLDDFAKeenvpvyVACLHTIAMLGPMCGFLLGSLCAKLYVDVGFVDlgkiaitpqDSRWVGAWWLGFLIAG 280 chicken
Feature 1                                                                                       #
Q9Y6L6       267 LFSIISSIPFFFLPqtpnkpqkerkaslslhvletn-dekdqtanltnqgknitknvtGFFQSFKSILTNPLYVMFVLLT 345 human
NP_001027493 261 AVNLMSAIPFFFLPeslkeeqregqkpqtk------------qgeekghkqkekptlrGFFAALKTLCFNRLFVMLMCLT 328 western clawed ...
NP_001305378 281 VISFLAAIPFCFLPkslkkplkankdktspgllenmgamrktlpsvkskpakwstmlkDFYTSLKKILSNRMYVTFLCCS 360 chicken
Feature 1          ##  ###  #                            #   #                                   
Q9Y6L6       346 LLQVSSYIGAFTYVFKYVEQQYGqpSSKANILLGVITIPIFASGMFLGGYIIKKFKLNTVGIAKFSCFTAVMSLSFYlly 425 human
NP_001027493 329 LLQTNSFLGFITYKPKYMEQQYGqsISKANFVTGVSTLPAAALGMFLGGLIMKRYKFGLLGASKMAYGTSLLAFLLSlsa 408 western clawed ...
NP_001305378 361 LLQFSSFIGFLTYKPKYMEMQYGqsASKSNFLIGLTSLPPVGIGIFLGGIIMKKYKMSITTATKFAFTMSFIAYSFTllh 440 chicken
Feature 1             ##   #   #                                                            #  ##
Q9Y6L6       426 FFILCENKSVAGLTMTYDGnnpvtshrdvPLSYCNSDCNCDESQWEPVCGNNGITYISPCLAGCKsSSGNKKPIVFYNCS 505 human
NP_001027493 409 FFIGCENNNVAGITVTYDRvkvnnfqdriIYSPCNSDCHCSSKQWDPVCGENGVTYVSACLAGCKaSTGSGLGTVYHNCS 488 western clawed ...
NP_001305378 441 FFVGCENQVIAGITASYDGkpipy-henaIFSDCNSGCKCATNVWDPVCGGNGLTYISACLAGCTiSEGHGKNMVFHNCS 519 chicken
Feature 1          ##  #                                                 
Q9Y6L6       506 CLEVTGLQNRNYSAhLGECPRDDACtRKFYFFVAIQVLNLFFSALGGTSHVMLIVK 561 human
NP_001027493 489 CIDTALSTAVNSSAhLGSCPRGPDCsRMFMFYVVTQAINTFIFALGASSAYVLLLW 544 western clawed frog
NP_001305378 520 CLEASSSWSGNNSVtLGQCPKSDDCsMMFIYYTVIQVVSGFCYALGGTPAYLIMYR 575 chicken

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