1W63,1W63


Conserved Protein Domain Family
AP1_Mu_N

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cd14835: AP1_Mu_N 
Click on image for an interactive view with Cn3D
AP-1 complex subunit mu N-terminal domain
AP-1 complex mu subunit is part of the heterotetrameric adaptor protein (AP)-1 complex which consists of one large gamma-, one beta-, one mu-, and one sigma-subunit. AP complexes link the cytosolic domains of the cargo proteins to the protein coat that induces vesicle budding in the donor compartment during vesicle transport. In the case of AP-1 the coat protein is clathrin. AP-1 binds the phospholipid PI(4)P which plays a role in its localisation to the trans-Golgi network (TGN)/endosome. The mu subunit is comprised of an N-terminal longin domain followed by a C-terminal domain which is involved in the binding of the Y-X-X-Phi sorting signal.
Statistics
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PSSM-Id: 341439
Aligned: 44 rows
Threshold Bit Score: 217.415
Created: 9-Jan-2014
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
AP-1 beta
Conserved site includes 32 residues -Click on image for an interactive view with Cn3D
Feature 1:AP-1 beta interface [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                    #  #                        ####         # # #           ####### 
1W63_M      4 SAVYVLDlKGKVLICRNYRGDvd-msEVEHFMPILMEkee-egMLSPILAHg--gVRFMWIKHNNLYLVATSKKNACVSL 79  house mouse
ELR24772    4 SAIFVLDlKGKVLLWRDYRGDvp-lnIAERFMNIIMAkd--eqDVRPIFEEd--gVTYIYVKYKNLYIMTVTKHNADAAM 78  Acanthamoeba caste...
EDP08288    4 SAIFFLDiKGRIIIFRDYRGDvs-pkYAEKFMSKINEmee-agKLSPVIYDe--gVTYLYLQVSNLYLLAVTRTNVNACS 79  Chlamydomonas rein...
EIE22155    4 SAVFILDlKGHVILFRDYRGDvp-ikYAERFITKLNElee-tgKVTPIILDe--gVSYLYVQYSNLYLLIVSRENVNAAS 79  Coccomyxa subellip...
EDQ52823    6 SAIFLLDmKGRVLIWRDYRGDvs-svQAERAFAKLMDgendpaSHDPILLEn--gVTYLFIQHNNVYVMTASRQNCNAAS 82  Physcomitrella patens
O22715      6 SALFLLDiKGRVLVWRDYRGDvs-aaQAERFFTKLIEkegdsqSNDPVAYDn--gVTYMFVQHSNVYLMIASRQNCNAAS 82  thale cress
EFN58684    5 SALLFLDaRGKPVLQRDYRGDvplakVAERFMAKLNElee-tgGAAPILLDg--nLSYVYVQYSNLYVLAVTKANVNAAA 81  Chlorella variabilis
EGR31285    5 SGIFILNnKGIVIIQRIYRSDls-sdSVETFNKLLIDkqe-dlIPNPIIYDpkdhQTYIFKHYNNITILAISKKNVNTMM 82  Ichthyophthirius m...
ABB13589    5 SGIFILNnKGRVIIQRVYRADlq-vhVIETFNKKLVEfd--efNQKPIVQDef-gNTYIYRNHNNLTFLIITRRNTNVMM 80  Tetrahymena thermo...
EGR28490   10 SALYILDhKGRVLINRCYKGDmp-inIHEIFNKKILEyd--eyTIKPILRDky-gHSYFYIQHNNLIFLAISRKNANCMM 85  Ichthyophthirius m...
Feature 1      #   #                          ##  ## ### ####        # ##     
1W63_M     80 VFSFLYKVVQVFSEYFke-lEEESIRDNfVIIYELLDELMDFGYPQTTDSKILQEFITQEGHKL 142 house mouse
ELR24772   79 LLIFLYKLIQVFTAYFqe-lEEESLKDNfVIIYELLDEMMDFGYPQATDAQILQEFITQEFYKM 141 Acanthamoeba castellanii str. Neff
EDP08288   80 TLVFLHRMVDVFKHYFqe-lEEESLRDNfVIVYELLDEVMDFGYPQFTEAKILAEYIKTDAYKM 142 Chlamydomonas reinhardtii
EIE22155   80 MLLFLHKLREVFVHYFne-lEEESLRDNfVIAYELLDEVMDYGYPQFTEAKILSEFIKTDAHKM 142 Coccomyxa subellipsoidea C-169
EDQ52823   83 LLLFLHRIVDVFKHYFee-lEEESLRDNfVVVYELLDEMMDFGYPQYTEAKILSEFIKTDAYRM 145 Physcomitrella patens
O22715     83 LLFFLHRVVDVFKHYFee-lEEESLRDNfVVVYELLDEMMDFGYPQYTEARILSEFIKTDAYRM 145 thale cress
EFN58684   82 TLVFLHKLIEIFKHYFheasREESLRDNfVIAYELLDERMLLCCPCTTPTAHPQFTEAKILSEY 145 Chlorella variabilis
EGR31285   83 IITFIYQLIDIFIYYFkl-lEEESIRDNfVVIYELLDEIMDNGFPQTTDFKILGDFIKTESHQL 145 Ichthyophthirius multifiliis
ABB13589   81 VFAFLYQFIEVLVHYFke-lEEESVRDNfVVIYELLDEVLDNGYPQITDCKNLSEFIKTESHEL 143 Tetrahymena thermophila
EGR28490   86 VFTFLYQLVQVFVDYFke-lEEESIRDNfVIIYELLDEMMDNGYPQTTENRILKEFIKTEYHEL 148 Ichthyophthirius multifiliis

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