Conserved Protein Domain Family
DEADc_DDX25

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cd18048: DEADc_DDX25 
DEAD-box helicase domain of DEAD box protein 25
DDX25 (also called gonadotropin-regulated testicular RNA helicase (GRTH) is a testis-specific protein essential for completion of spermatogenesis. DDX25 is also a novel negative regulator of IFN pathway and facilitates RNA virus infection. Diseases associated with DDX25 include hydrolethalus syndrome, an autosomal recessive lethal malformation syndrome characterized by multiple developmental defects of fetus.. DDX25 (also called gonadotropin-regulated testicular RNA helicase) is a member of the DEAD-box helicases, a diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (motif II). This domain contains the ATP-binding region.
Statistics
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PSSM-Id: 350806
Aligned: 3 rows
Threshold Bit Score: 467.961
Created: 18-Jul-2017
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:based on structures of other members of the DEAD-box helicase family with bound ADP/AMP

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                             # #    #                   #######         
Q9UHL0        80 HRVEVLQKDPSSPLYSVKTFEELRLKEELLKGIYamGFNRPSkIQEMALPMMLAhpPQNLIAQSQSGTGKTAAFVLAMLS 159 human
NP_001016345  76 HSVEVSQRDPTSPLFSVKSFEKLHLKDELLRGIYamGFNRPSkIQENALPMMLAdpPQNLIAQSQSGTGKTAAFVLAMLS 155 tropical clawed...
Q9DGP9        80 HNVEVLQRDPTSPLFSVKSFEELHLKNELLRGIYamGFNRPSkIQENALPMMLAdpPQNLIAQSQSGTGKTAAFVLAMLS 159 African clawed ...
Feature 1                                                                                        
Q9UHL0       160 RVnalelfpQCLCLAPTYELALQTGRVVEQMgkfcvDVQVMYAIRGnriprgtdiTKQIIIGTPGTVLDWCFKlklIDLT 239 human
NP_001016345 156 RVdakktypQCMCLSPTFELALQTGKVVEEMgkfcnGIKVIYAVRGnrpgkgtqiEAQIVIGTPGTVLDWCFKlrlINVK 235 tropical clawed...
Q9DGP9       160 RVdankkypQCICLSPTFELALQTGKVVEEMgkfcaGIEVIYALRGnrpgkgsrlEAQIVIGTPGTVLDWCFKlrlITVE 239 African clawed ...
Feature 1                #                               #                            
Q9UHL0       240 KIRVFVLDEADVMIdtQGFSDHSIRIQRALPsECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKEELT 308 human
NP_001016345 236 NISVFVLDEADVMInvQGHSDHSVRVKRSMPkTCQMLLFSATFGDSVWAFAERIVPDPNIIKLKKEELT 304 tropical clawed frog
Q9DGP9       240 NISVFVLDEADVMInvQGHSDHSVRVKRSMPkSCQMLLFSATFEDSVWAFAERIVPDPNIIKLKKEELT 308 African clawed frog

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