5E7I


Conserved Protein Domain Family
DEADc_DDX3

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cd18051: DEADc_DDX3 
Click on image for an interactive view with Cn3D
DEAD-box helicase domain of DEAD box protein 3
DDX3 (also called helicase-like protein, DEAD box, X isoform, or DDX14) has been reported to display a high level of RNA-independent ATPase activity stimulated by both RNA and DNA. This protein has multiple conserved domains and is thought to play roles in both the nucleus and cytoplasm. Nuclear roles include transcriptional regulation, mRNP assembly, pre-mRNA splicing, and mRNA export. In the cytoplasm, this protein is thought to be involved in translation, cellular signaling, and viral replication. Misregulation of this gene has been implicated in tumorigenesis. Diseases associated with DDX3 include mental retardation, X-linked 102 and agenesis of the corpus callosum, with facial anomalies and robin sequence. DDX3 is a member of the DEAD-box helicases, a diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif (motif II). This domain contains the ATP-binding region.
Statistics
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PSSM-Id: 350809
Aligned: 22 rows
Threshold Bit Score: 511.893
Created: 30-Jan-2014
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 18 residues -Click on image for an interactive view with Cn3D
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:based on the structure of Drosophila Vasa with bound MgANP

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #         #              #                 # ###  #                 #######     
5E7I_B     28 FEKYDdipVEATGNNCPph---iESFSDVEMGEIIMGNIEltRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLL 104 human
NP_536783 275 FDKYEdipVEATGQNVPpn---iTSFDDVQLTEIIRNNVAlaRYDKPTPVQKHAIPIIINGRDLMACAQTGSGKTAAFLV 351 fruit fly
EKC34259  271 FDKYEdipVEATGENCPkn---iETFEDCSLGEIIRNNITlsRYSKPTPVQKYAIPIVLNKRDLMACAQTGSGKTAAFLV 347 Pacific oyster
EFX70372  201 FDKYEdipVEATGNDVPah---iNTFEDVKLTEIIRSNIAltRYDKPTPVQKYAIPIILARRDVMACAQTGSGKTAAFLV 277 common water flea
AJW77404  264 FDKYEdipVEATGEDCPpn---vESFADLNLGEIIGNNVVlsKYDTPTPVQKHAMPIIMNKRDLMACAQTGSGKTASFLV 340 Alitta virens
BAB13309   12 FDRYEdipVEASGEDPPkh---iEKFSDCQLSEIIQLNVEltHYSKPTPVQKHALPIILSKRDLMACAQTGSGKTAAFLI 88  Ephydatia fluviatilis
BAB13306  151 FDKYEdipVEATGSNTPks---iETFDEANLGEIILTNISlaHYTKPTPVQKNSIPIIKAKRDLMACAQTGSGKTAAFLV 227 Hydra vulgaris
CBY10092  120 FEKYDdipAEVTGEDPPss---vNTFAECELGDIINEAIKlaNYTVPTPVQKNAIPIINKGRDLMSCAQTGSGKTAAFLL 196 Oikopleura dioica
KFM69414  255 FEKYEdipVEATGEDCPeq---iSNFLEMPLTELVRFNIEmaSYKSPTPVQKHAMPIILSKRDLMACAQTGSGKTAAFLM 331 Stegodyphus mimosarum
AFM77716  150 FNQYDnipVNATGPNFNdsastiSSFTELSLHKIVRDNVElaNYERPTPVQKHAIPIIASGRDLMACAQTGSGKTAAFLI 229 Schistosoma mansoni
Feature 1                                                                                     
5E7I_B    105 PILSQIysdgpgealr------amkengrygRRKQYPISLVLAPTRELAVQIYEEARKFSYRSrVRPCVVYGGadiGQQI 178 human
NP_536783 352 PILNQMyelghvpp---------pqstrqysRRKQYPLGLVLAPTRELATQIFEEAKKFAYRSrMRPAVLYGGnntSEQM 422 fruit fly
EKC34259  348 PVLNRVyengpeesa-------nvaqsrqygRRKQYPLALVLAPTRELAYQIYDEARKFAYRSrVRPCVVYGGadiGAQM 420 Pacific oyster
EFX70372  278 PILNQLfergpvvnq--------sagqrsygRRKQYPLALVLAPTRELATQIYDEAKKFAYRSrVRPCVVYGGadvRQQM 349 common water flea
AJW77404  341 PVLSQIftggqpef---------ireqnnrnNRKQYPIALVLAPTRELASQIYEEARKFAYRShVRPCVVYGGadiGAQM 411 Alitta virens
BAB13309   89 PILDLVfqqgcprp---------psdsrysgRRKQYPTALVLGPTRELAVQIFEEARKFSYRSrVRPCVVYGGadiGAQM 159 Ephydatia fluviatilis
BAB13306  228 PILSRIfeegpfen---------psnvrqggKKKQYPIALVLAPTRELASQIYDESRKFVYRScIRPCVVYGGadvSTQM 298 Hydra vulgaris
CBY10092  197 PMLSSIfhsgpgesa-------nqnssgyrgRRKIYPLALVLSPTRELASQIYEESRKFAYRSqVRPCVIYGGadvGAQM 269 Oikopleura dioica
KFM69414  332 PILNQIfeegppknlpvmflqqaqpqtrypgRMKQYPMALVLSPTRELACQIYDEACKFSYRSrVRPCVVYGGadpVQQM 411 Stegodyphus mimosarum
AFM77716  230 PILNNMikqgpgds---------isatinnnRRKQFPVALILAPTRELASQIFDDARKFSYRSlIRPCVLYGGadmRTQL 300 Schistosoma mansoni
Feature 1                                         ##                                  #       
5E7I_B    179 RDLERGCHLLVATPGRLVDMMERGKiGLDFCKYLVLDEADRMLdMGFEPQIRRIVEQDTMPPkGVRHTMMFSATFPKEIQ 258 human
NP_536783 423 RELDRGCHLIVATPGRLEDMITRGKvGLENIRFLVLDEADRMLdMGFEPQIRRIVEQLNMPPtGQRQTLMFSATFPKQIQ 502 fruit fly
EKC34259  421 RDLDRGCHLLVATPGRLVDMLERGKiGLEHCKFLCLDEADRMLdMGFEPQIRRIVEKDNMPPsGVRQTLMFSATFPKEIQ 500 Pacific oyster
EFX70372  350 QDLERGCHLLVATPGRLVDMLERGKiGLEHCNFLVLDEADRMLdMGFEPQIRRIVEQDTMPKtGDRQTLMFSATFPKEIQ 429 common water flea
AJW77404  412 RDLQKGCHLLVATPGRLVDMLERGKvGLDQIRFVVLDEADRMLdMGFEPQIRRIVEKDNMPPtGQRRTLMFSATFPKEIQ 491 Alitta virens
BAB13309  160 RDLEHGCHLLVATPGRLVDMMERGKiGLDGVRYLVLDEADRMLdMGFEPQIRRIVEQDVMPKtGDRQTLMFSATFPKEIQ 239 Ephydatia fluviatilis
BAB13306  299 RDIDRGCHLLVATPGRLVDMIQRGKvGLECIKFLVLDEADRMLdMGFEPQIREIVEKCDMPRtGERQTLMFSATFPKEIQ 378 Hydra vulgaris
CBY10092  270 RDLDRGCHLLVATPGRLADFLDRGKiGLDYCRYLCLDEADRMLdMGFEPQIRRIVEKDAMPPkGDRQTLMFSATFPKEIQ 349 Oikopleura dioica
KFM69414  412 KDLDRGCHLLVATPGRLVDMIERGKlSLEMVKYLVLDEADRMLdMGFEPQIRRIVLEDNMPPlGKRQTLMFSATFPKKVQ 491 Stegodyphus mimosarum
AFM77716  301 MELSEGCNLLVATPGRLSDVLERGRvGLDYCRFLVLDEADRMLdMGFEPQIRRIVEQDALPPsGERQTLMFSATFPNEIQ 380 Schistosoma mansoni
Feature 1                         
5E7I_B    259 MLARDFLDEYIFLAVGRVGS 278 human
NP_536783 503 ELASDFLSNYIFLAVGRVGS 522 fruit fly
EKC34259  501 MLARDFLDNYIFLAVGRVGS 520 Pacific oyster
EFX70372  430 MLARDFLENYIFLAVGRVGS 449 common water flea
AJW77404  492 MLARDFLHNYIFLAVGRVGS 511 Alitta virens
BAB13309  240 MLARDFLHDYIFLAVGRVGS 259 Ephydatia fluviatilis
BAB13306  379 MLARDFLDNYIFLAVGRVGS 398 Hydra vulgaris
CBY10092  350 HLARDFLDNYIFLTVGRVGS 369 Oikopleura dioica
KFM69414  492 ELARNFLNNYIFLAVGRVGS 511 Stegodyphus mimosarum
AFM77716  381 ILAKDFLNNYIFLTVGRVGS 400 Schistosoma mansoni

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