Conserved Protein Domain Family
DEXHc_SMARCA4

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cd18062: DEXHc_SMARCA4 
DEXH-box helicase domain of SMARCA4
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 (SMARCA4, also known as transcription activator BRG1) is a component of the CREST-BRG1 complex that regulates promoter activation by orchestrating a calcium-dependent release of a repressor complex and a recruitment of an activator complex. Mutation of SMARCA4 (BRG1), the ATPase of BAF (mSWI/SNF) and PBAF complexes, contributes to a range of malignancies and neurologic disorders. SMARCA4 is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Statistics
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PSSM-Id: 350820
Aligned: 4 rows
Threshold Bit Score: 510.356
Created: 3-Feb-2014
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
ATP bindingDEAD box
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:based on the structure of Saccharomyces cerevisiae Chd1 with bound gamma-thio-ATP

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                           #######                       
NP_853634     743 YYAVAHAVTEKVEKQSSLLVNGQLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMefkrlnGPFLIIV 822  zebrafish
A7Z019        723 YYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMehkrinGPFLIIV 802  cattle
NP_001165424  716 YYAVAHAVSEKVEKQSSLLVNGILKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMehkrinGPFLIIV 795  African clawe...
NP_001122316  731 YYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMehkrinGPFLIIV 810  human
Feature 1                   #                                                           ##        
NP_853634     823 PLSTLSNWVYEFDKWaPSVVKVSYKGSPAARRAFLPILrsgKFNVLVTTYEYIIKdkqvLAKLRWKYMIVDEGHRMKnhh 902  zebrafish
A7Z019        803 PLSTLSNWAYEFDKWaPSVVKVSYKGSPAARRAFVPQLrsgKFNVLLTTYEYIIKdkhiLAKIRWKYMIVDEGHRMKnhh 882  cattle
NP_001165424  796 PLSTLSNWVYEFDKWgPSVVKVSYKGSPAARRAFVPMLrsgKFNVLLTTYEYIIKdkqiLAKIRWKYMIVDEGHRMKnhh 875  African clawe...
NP_001122316  811 PLSTLSNWAYEFDKWaPSVVKVSYKGSPAARRAFVPQLrsgKFNVLLTTYEYIIKdkhiLAKIRWKYMIVDEGHRMKnhh 890  human
Feature 1                                                                                         
NP_853634     903 CKLTQVLNTHYlaPRRVLLTGTPLQNKLpELWALLNFLLPTIFKSCSTFEQWFnapfamtgekvdlneeetiliirrLHK 982  zebrafish
A7Z019        883 CKLTQVLNTHYvaPRRLLLTGTPLQNKLpELWALLNFLLPTIFKSCSTFEQWFnapfamtgekvdlneeetiliirrLHK 962  cattle
NP_001165424  876 CKLTQVLNTHYvaPRRLLLTGTPLQNKLpELWALLNFLLPTIFKSCSTFEQWFnapfamtgekvdlneeetiliirrLHK 955  African clawe...
NP_001122316  891 CKLTQVLNTHYvaPRRLLLTGTPLQNKLpELWALLNFLLPTIFKSCSTFEQWFnapfamtgekvdlneeetiliirrLHK 970  human
Feature 1                    
NP_853634     983 VLRPFLLRRLK 993  zebrafish
A7Z019        963 VLRPFLLRRLK 973  cattle
NP_001165424  956 VLRPFLLRRLK 966  African clawed frog
NP_001122316  971 VLRPFLLRRLK 981  human

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