Conserved Protein Domain Family
DEXQc_SHPRH

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cd18070: DEXQc_SHPRH 
DEXQ-box helicase domain of SHPRH
E3 ubiquitin-protein ligase SHPRH is a ubiquitously expressed protein that contains motifs characteristic of several DNA repair proteins, transcription factors, and helicases. SHPRH is a functional homolog of S. cerevisiae RAD5 and is involved in DNA repair. SHPRH is a member of the DEAD-like helicase superfamily, a diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
Statistics
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PSSM-Id: 350828
Aligned: 16 rows
Threshold Bit Score: 229.538
Created: 3-Feb-2014
Updated: 17-Oct-2022
Structure
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Aligned Rows:
 
ATP bindingDEAD box
Feature 1:ATP binding site [chemical binding site]
Evidence:
  • Comment:based on the structure of Saccharomyces cerevisiae Chd1 with bound gamma-thio-ATP

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
XP_003200358  281 LRPYQSQAVNWMLrrekyksssspeqrlhflwremvti------------------------------------------ 318  zebrafish
CCA41132      258 LFKFQSKTVNWLLghegvefnhdtktttqlpfysppescdtdtfhnylieclnk-------------------------- 311  Pichia pastor...
ABO96655      133 PRSYQKQAVGWMLarerakdapagalsakrggdvdktelhpl-------------------------------------- 174  Ostreococcus ...
EGD73089      412 LNTYQLRAIHWMAeqernpvdipmihpywveikgdap------------------------------------------- 448  Salpingoeca s...
Q9UTL9        218 LLPFQMRVLEWMKrreeekfltsndlpplwyhckslfdd----------------------------------------- 256  Schizosacchar...
NP_013348     291 LLPFQRESVEWMLikeghgnslsdtptvidevglidfmneyyaygyeliarsp--------------------------- 343  Saccharomyces...
ADY40142       80 LRPYQMDAVRFMIsrevepdlgysskdffvqiptn--------------------------------------------- 114  pig roundworm
EGB12336     1744 MKPYQLMALRWMRsmeeldrglnglfwerrdfvd---------------------------------------------- 1777 Aureococcus a...
CBQ67843      613 LLGYQARCLAWMIkretvvdedvghlmpnwfplrcksaahimqrrlqleaerealldamqrglsrsrrvvnvkaaqaata 692  Sporisorium r...
EGB08412       65 LLPHQRSALAWMLare---------------------------------------------------------------- 80   Aureococcus a...
Feature 1                                                                    #######              
XP_003200358  319 --------------------------cgkklfynpytgclirefplagvdWPGGILADEMGLGKTVEVLALILCNTrqnl 372  zebrafish
CCA41132      312 ----------lsfgwnrirideevyfynqysgnivspdkiiayfktlaptNAQGLLSEEMGLGKTVEMIATIMLHPrpel 381  Pichia pastor...
ABO96655      175 ---------------------wrelpegggyinpysghltktrfecdfesVSGGILADEMGLGKTVEVIMLVLANReprr 233  Ostreococcus ...
EGD73089      449 ---------------------------ntlwfhrygvkmatiaapewrmrVRGGLLADEMGLGKTLEVIGLVLLHPrpsn 501  Salpingoeca s...
Q9UTL9        257 ------------------------rmvyvnhvygymtfskektyllasgdIRGGILADEMGMGKTLEVLGLVLHHQlpis 312  Schizosacchar...
NP_013348     344 ----------devgpsllwnkltgyilttedaahlynqyrkerlsgdypvCAKGVLAEEMGLGKTIEILSLILLNRrklk 413  Saccharomyces...
ADY40142      115 ----------------------------ppfyfalytgamfdslphpfevPPGGILADEMGLGKTVELLGLIMSHRrgdt 166  pig roundworm
EGB12336     1778 ------------------------------ggcfyyapdlgearleapptVHGGLLSDEMGMGKTLEMLSLVCARPataa 1827 Aureococcus a...
CBQ67843      693 vdtngvqsststiahsslkrepfidpadqvfyydqvsgllslrrfscrpsEPGGALCESMGLGKTLESLSLIAAHPrpdn 772  Sporisorium r...
EGB08412       81 ------------------------------------------------rdASGGVLADEPGLGKTLTCLALVATDWaakg 112  Aureococcus a...
Feature 1                                                                                         
XP_003200358  373 ehgvltlpvgrsvnyfvpppplerqriikheprpkekiiypavremlltaikemkvgkgasinaifaylrtmykydtlkn 452  zebrafish
CCA41132      382 elesqifd------------------------------------------------------------------------ 389  Pichia pastor...
ABO96655      234 aqsrsqfvpppmtddmkeeiddvvlikddeapvkvccpcgarhddpfydglwiec------------------------- 288  Ostreococcus ...
EGD73089      502 ggddgdddddgdddnddegddegeeekdlqeaeedqgkgkekdkaqakgleratedntnmnwmqrdadgmnghgygvstn 581  Salpingoeca s...
Q9UTL9        313 ltdtctfd------------------------------------------------------------------------ 320  Schizosacchar...
NP_013348     414 dseatfid------------------------------------------------------------------------ 421  Saccharomyces...
ADY40142      167 pttdpdpivkrsviaivleeivstvvagleanlprgtmtrkrswdlhyneiedesv------------------------ 222  pig roundworm
EGB12336     1828 alaaadlaader-------------------------------------------------------------------- 1839 Aureococcus a...
CBQ67843      773 pdllaydtsrsar------------------------------------------------------------------- 785  Sporisorium r...
EGB08412      113 rk------------------------------------------------------------------------------ 114  Aureococcus a...
Feature 1                                                                                         
XP_003200358  453 rnhikkiltkliseniveqikgrglagsfklgknykekkkkpvtartksadqpaprrtsrrvsapdkdssltsytttasd 532  zebrafish
CCA41132          --------------------------------------------------------------------------------      Pichia pastor...
ABO96655          --------------------------------------------------------------------------------      Ostreococcus ...
EGD73089          --------------------------------------------------------------------------------      Salpingoeca s...
Q9UTL9            --------------------------------------------------------------------------------      Schizosacchar...
NP_013348         --------------------------------------------------------------------------------      Saccharomyces...
ADY40142          --------------------------------------------------------------------------------      pig roundworm
EGB12336          --------------------------------------------------------------------------------      Aureococcus a...
CBQ67843          --------------------------------------------------------------------------------      Sporisorium r...
EGB08412          --------------------------------------------------------------------------------      Aureococcus a...
Feature 1                                                                                         
XP_003200358  533 sasedsmnppllteelksdpdslldpenplqkkpvditddkeipdkpqlqitedvhiesnkpdlmqtskpevetptrasv 612  zebrafish
CCA41132          --------------------------------------------------------------------------------      Pichia pastor...
ABO96655          --------------------------------------------------------------------------------      Ostreococcus ...
EGD73089      582 ----------------------------------------------------------------typstastmlyatpts 597  Salpingoeca s...
Q9UTL9            --------------------------------------------------------------------------------      Schizosacchar...
NP_013348         --------------------------------------------------------------------------------      Saccharomyces...
ADY40142          --------------------------------------------------------------------------------      pig roundworm
EGB12336          --------------------------------------------------------------------------------      Aureococcus a...
CBQ67843          --------------------------------------------------------------------------------      Sporisorium r...
EGB08412          --------------------------------------------------------------------------------      Aureococcus a...
Feature 1                                                                                         
XP_003200358  613 vpfntpdyrfecicgelglvdykprvqclncllwqhaecvnykeenlettpfycphclvamtpvstgaTLIISPS-SICH 691  zebrafish
CCA41132      390 --------------------------------------------------------pvagrnvrkcksSLIVCPE-SILK 412  Pichia pastor...
ABO96655      289 ---------ekcetwmharcvglaqsrnqeiklmkmseeergrklkdftcgkciaahasetvdetcgaTLVVCPS-AIIK 358  Ostreococcus ...
EGD73089      598 asapamttaahvpamkklgphewhcakcsvpfvlythdidaetrkliarehvlctdclrkqehlvansTLIVSPA-RICA 676  Salpingoeca s...
Q9UTL9        321 --------------------------------------------------------qvvgknvkyskaTLIITPS-TILD 343  Schizosacchar...
NP_013348     422 ---------------------------------------------------------denrtitktktTLIICPN-AILK 443  Saccharomyces...
ADY40142      223 ---------kkrakmsnsvnvvstikclacgvtcsqakvfwdrfdssaipfycpncvqkqeskkaikaTLVIAPS-TICH 292  pig roundworm
EGB12336     1840 ----------------------------------------------------eapddgaakplaasraTLLVLPP-ALVS 1866 Aureococcus a...
CBQ67843      786 ----------------------------------------------------miaemepserpfvsraTLVVCPA-ALVE 812  Sporisorium r...
EGB08412      115 --------------------------------------------------------------rararpTLVVAPTaGVRA 132  Aureococcus a...
Feature 1             #                                                                           
XP_003200358  692 QWVDEINRhihtsslRVLVYQGVkrhgfiq------------------------------philaeqDVVITTYDVLRTe 741  zebrafish
CCA41132      413 QWRDDIYNfnp--hlKVIFYKGIsnnkqfkdps-------------------------iiaehlaehDIILTTYNTVAKe 465  Pichia pastor...
ABO96655      359 QWRDECKQhvrpgtlKIITYEGQskrsgaggsmk----------------------gvfsakeladaDIVLTTYDTLRTe 416  Ostreococcus ...
EGD73089      677 QWCDEVKRnap-tavRILDYTGAkklgslh------------------------------paivatyDIVVTTYKVLRDd 725  Salpingoeca s...
Q9UTL9        344 QWLSEIDLhvp--slKVFHYQGIrksnglks-----------------------------akifldcDIVVTSYSDLRFe 392  Schizosacchar...
NP_013348     444 QWLEEIELhan--slKWYTYRGYneimkdcktv------------------------deavqqlcqyDIIVTSYNIIATe 497  Saccharomyces...
ADY40142      293 QWYEEVKRhvr-ddvSVDMYNGVaaegykh------------------------------peylatrDIVICSFETLANe 341  pig roundworm
EGB12336     1867 QWLDEIRKstvapgpRVACFVTDedrkalvpercdlrgaggkk----atkreffvqrraalerladhDVVVTTYNALTGp 1942 Aureococcus a...
CBQ67843      813 QWMDEIHKhf----rSRSTFAMDesedatalnqqpgviryrhagfawdvrsrrsdvralaesklvepDIVVATYEELAFq 888  Sporisorium r...
EGB08412      133 QWAAEANRfyg-savVVDCYDGApsdpaeasa---------------------------vadrlaraQLVVCDLTALRKe 184  Aureococcus a...
Feature 1                                                                                       ##
XP_003200358  742 lnyvdiphsnskdgrrf--------------------------------------rnqkrymaipsplvaveWWRVCLDE 783  zebrafish
CCA41132      466 vhyamynptdrplrkaakdgrmkaqieeenatsipnendaakseriastlrkqssdefverydyssplvllqFWRVILDE 545  Pichia pastor...
ABO96655      417 ididtanghglagaera-------------------------------------rryekkyevvptpltrlkWWRVVLDE 459  Ostreococcus ...
EGD73089      726 ihfwkafknprhstrr---------------------------------------rtsskprtymcplmlleWWRVCLDE 766  Salpingoeca s...
Q9UTL9        393 llyteshsrtlrhe--------------------------------------------krhvspksplidvcWWRICVDE 428  Schizosacchar...
NP_013348     498 vhhaefnrsirsrrl------------------------------------------kspkydyssplalmqFYRIILDE 535  Saccharomyces...
ADY40142      342 vyfietneklgslr-------------------------------------------srkylipptpllsveWWRVCVDE 378  pig roundworm
EGB12336     1943 vydkrrgann----------------------------------------------------gdaqplsqihWHRVVLDE 1970 Aureococcus a...
CBQ67843      889 laeshrvphsd--------------------------------------------------dqvrtpllevlFWRILLDE 918  Sporisorium r...
EGB08412      185 rhfrsaeragrgr---------------------------------------------srggelraplfhvdWRRVVVDE 219  Aureococcus a...
Feature 1                                                                                         
XP_003200358  784 AQMVECttAKAAEMALRLTsVNRWCVSGTPVQRg-LEDLYGLVLFLGVdpywvkywwdqllyr-------pyrhgntapl 855  zebrafish
CCA41132      546 VQMVTSkiSNAAKICKMIPrAHAWGVSGTPIRNn-LDDLQAILSFLRFhpfddndsqkrvriknpn-welvksakppltf 623  Pichia pastor...
ABO96655      460 AQMVEStvSKAAEMVRRLPtVHRWAVTGTPISRg-LGDIFGLLTFLMVspfqhgdfwwrrmieip---ymsgdvsarell 535  Ostreococcus ...
EGD73089      767 AQMIEMgtQKATEMAWNFKaVNRWCVTGTPMTTs-VSDLFGIFGFFDIdmgtprmfdayvcdrn------qllpdgshdi 839  Salpingoeca s...
Q9UTL9        429 AQMVETsqSNVAQMIYRIPrVNCWTVSGTPVRSe-VDDLFGLLFLLRYspmylykkqawmqi---------iekkrvref 498  Schizosacchar...
NP_013348     536 VQMLRSssTYSAKCTSLLHrIHTWGVSGTPIQN--IYNFRMIMSYLKLhpfcdevd----------------------fi 591  Saccharomyces...
ADY40142      379 AQVIESrtSVVSEMCWRLQaVNRWCITGTPITDs-VDNLFGLLCFIGVepycysnwwngalwl-------pyengcsepl 450  pig roundworm
EGB12336     1971 MQMVSSpnTVLARTCADLWaSSRWMVSGTPLCDg-ILDLNGELRFLGVypfslsdasdgfwhhc-----vqrpwdlrdpa 2044 Aureococcus a...
CBQ67843      919 AQIVAGasGKATNMVHELWrSNCWMVTGTPVTKg-IGDIQGIFAFMDHdpfaaprffreilqqpf----srgcvegirrl 993  Sporisorium r...
EGB08412      220 VQDVEGr-SAGADVARELPaERRWGVSGTPVGKggLDALFGLFSFLGAepyrdadwwaahvrrplkggtrterdaalata 298  Aureococcus a...
Feature 1                    
XP_003200358  856 ynvigQLLWRS 866  zebrafish
CCA41132      624 vrlwsKIALRH 634  Pichia pastoris GS115
ABO96655      536 hkilkGLMWRN 546  Ostreococcus lucimarinus CCE9901
EGD73089      840 qrlvmSFAWRS 850  Salpingoeca sp. ATCC50818
Q9UTL9        499 cdlfgSLVCRH 509  Schizosaccharomyces pombe 972h-
NP_013348     592 rtlqeEIKLRN 602  Saccharomyces cerevisiae S288c
ADY40142      451 vdlfsKIFWRN 461  pig roundworm
EGB12336     2045 alerlELLLRT 2055 Aureococcus anophagefferens
CBQ67843      994 railpRFVWRH 1004 Sporisorium reilianum
EGB08412      299 gaamaELVWRS 309  Aureococcus anophagefferens

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