4AQT,4OVE,2Y38,4WNX,3ZYJ


Conserved Protein Domain Family
Laminin_N

?
pfam00055: Laminin_N (this model, PSSM-Id:365840 is obsolete and has been replaced by 459653)
Click on image for an interactive view with Cn3D
Laminin N-terminal (Domain VI)
Statistics
?
PSSM-Id: 365840
Aligned: 164 rows
Threshold Bit Score: 175.022
Created: 18-Apr-2019
Updated: 18-Jul-2019
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4AQT_A         28 FNVTVVATNTCG-TPPEEYCVQTGVTGv-------------------------------TKSC--HLCDAG--QqhlqHG 71   house mouse
GAA52816       18 ENAEITANATCGeHRREYYCRLVEHADgaliykrlererrqvmtyfqqqprsyrdpsgqWVQC--SFCDAR--NeslrHP 93   Clonorchis si...
CDS33692       69 EHAIINANATCGeRKREYYCRLVEHAGydfaallrikrqvfs---nqkdartfkdvdgtVIEC--NYCDAR--DpslrHP 141  Hymenolepis m...
XP_017949700   44 TNARITTNATCGeKGQETFCKLVEHVPgqp---------------------------lrYSQC--RTCDQKssNpnlrHP 94   tropical claw...
XP_026689696  165 SHADITSNATCGeTGPVKYCKLVEHVDrrt---------------------------nrGQQC--RMCDAFsrNpterHS 215  vase tunicate
NP_476790     162 PRAQISVNATCGqNGAEEYCKQVG-----------------------------------AKPC--GICNAHssDrakqRS 204  fruit fly
XP_023031444   37 SRATITVNATCGqNGAEEYCKLVDAYPhp----------------------------nwAKQC--GTCNAHssDrskqRP 86   Drosophila wi...
XP_317647      13 LRATISVNATCGqTGREEYCRLAEGAGrs-----------------------------rGSQC--GICDANnpDpekrHP 61   Anopheles gam...
XP_002428616   41 KHADILVNGTCGaNRPEVYCR-----Rptdk------------------------earkANQCipTLCDSk------kNG 85   human body louse
KYB27445       55 TKAIISANATCGeNGREEFCRMLEGGK---------------------------------GRC--GICDNFstDpgkkHP 99   red flour beetle
4AQT_A         72 AAFLTDyn------nQAdTTWWQSQTMLaGV--QypNSINLTLHLGKAFDITYVRLKFH-TSRPESFAIYKRTReDGPWI 142  house mouse
GAA52816       94 IEFVRS---------GEpHLWWQSPSLA-EGlkY--HAVTITMDFKQVYQIVYVLLRMGdSPRPANWILERSLD-GQNYK 160  Clonorchis si...
CDS33692      142 IEYAVS---------GDnNLWWQSPSLA-EGlqY--HAVTIDIDLKQVYQIVFILLRMGdSPRPANWILEKSID-GKDFQ 208  Hymenolepis m...
XP_017949700   95 ISNAIN---------GK-NSWWQSPSIQ-NGmqY--HYVTVTLDLQQVFQIAYIIIKAAnSPRPGNWILERSLD-GVNFK 160  tropical claw...
XP_026689696  216 VQHAID---------GRgDRWWQSPTID-QGyqY--HRVTLTLDLRQVFQVAYVIVKAAnSPRPGNWILEKSID-GVSWE 282  vase tunicate
NP_476790     205 IQSLISsgsgsgsgsGFeEGWWQSPTLQ-GGrqF--EYVTILLDLKQTFQIFSVWLKSAnSPRPASWILEKSLD-GINFE 280  fruit fly
XP_023031444   87 IESLISsg------sSYdESWWQSPTLQ-GGrqF--EYVTITLDLKQTYQIFFVTLKSAnSPRPASWILEKSLD-GINYE 156  Drosophila wi...
XP_317647      62 ITNIVD---------GT-NSWWQSPTLQ-KGakN--DRVTINLDLGQLYQIVFFTMRAAiSPLPAAWVLEKSMD-GRAYD 127  Anopheles gam...
XP_002428616   86 IKKTID---------GS-KDSWISPTLE-NGleY--EYITITLDLKQVYQVAYVTIKASiAPLPVAWVLERSLD-GLNFF 151  human body louse
KYB27445      100 ISYAID---------GT-HRWWQSPALF-YGskY--EYVTITIDLKQIYQITDIIIKSAnSLRPGTWILERSLE-GKNYE 165  red flour beetle
4AQT_A        143 PYQYYS---GSCENTYs-KanRgfirTGGd--------EQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFD------ 204  house mouse
GAA52816      161 PWVFFAeseYDCKRLY--EplLegplTVTsgprpwkleDDEVYCTTYYSQPQALQSGEIIVTLSLDRASTISTTlglera 238  Clonorchis si...
CDS33692      209 PWVFFAenaQQCMSMF--QptMngtlRITsdsrphklgNTEVYCTTYFSQPQNLQAGEIIIPLTVDREGASASYleaskp 286  Hymenolepis m...
XP_017949700  161 PWQYYAiteSECLTRYk-VkpQpaqaSFAk--------DDEVICTSHYSKIHPLENGEIFTSLIIGRPSAED-------- 223  tropical claw...
XP_026689696  283 PWQYFAtsdRECLSQYgtVasRlgspNYKs--------DSEVMCTTYFSKLNPFENGEIHVSLINGRPSAEN-------- 346  vase tunicate
NP_476790     281 PWQYFGlsdADCQRRWn-LsgQngkyVFQn--------DTEIICSTQFSKPGPLENGVLHASLLKNRPGATD-------- 343  fruit fly
XP_023031444  157 PWQYFGlsdADCKRRWn-LsgEngkyFFQn--------DTEVICSTQFSKPLPLENGEIHVSLLKNRPGAME-------- 219  Drosophila wi...
XP_317647     128 AWQYFAaddTECRERFg-LpaYtanyIFKs--------DTEVICSTQFSSLEPLENGEINLSIISGRPSEMI-------- 190  Anopheles gam...
XP_002428616  152 PWQYFAessGECRRRYg-MpaSqpkpIFKt--------DDEVICLINYSKLYYIDNQEVHVSLINGRPSFNY-------- 214  human body louse
KYB27445      166 PWQYFArndKECFERFg-IpgTkgkpHYFt--------DTEIICTSFYSKLTPMENGEIHTSLINGRPGANE-------- 228  red flour beetle
4AQT_A        205 NSPVLQEWVTATDIRVTLNRLNTF---------GDEVFNEPKVLKSYYYAISDFAVGG 253  house mouse
GAA52816      239 VSPKLIDFLSARYVRLRFQKLQTLsgd----wmAMPNQLDSSVYNRYYYSIRTIKVGG 292  Clonorchis sinensis
CDS33692      287 IDPELIEFLSARFVRLRFQKLQTLsgd----wmTLRDQLDPTVYNRYYYSIRNIKIGG 340  Hymenolepis microstoma
XP_017949700  224 PSPELLEFTSARYIRLRLQRIRTLnadlmmlsqSTYKDIDPIVTRRYFYSIKDISVGG 281  tropical clawed frog
XP_026689696  347 PSAELVEFTSARYIRLRLQKIRTLhgdl-mtlsFNRAENDPSVTRRYYYSIKDISVGG 403  vase tunicate
NP_476790     344 QSPELMKFITTRYIRIRLQGMHSTanq---dnsLDWLLDSPSLEKHSFYSLSQLKVSa 398  fruit fly
XP_023031444  220 QTPELQKFITARYMRIRLQGMHSTanl---dnsVDWLLDSQSLEKRSFYSLKQLRVSa 274  Drosophila willistoni
XP_317647     191 TSPELQNFTLARYVRIRLLRMQSAeaq---rfkTKCFMCTKSFSSRSFYTIRSLRIGG 245  Anopheles gambiae str. PEST
XP_002428616  215 TSEILRNFTLARYVRFKFQKIHKTekd-------------liLRKKLFYSIKNIIIGG 259  human body louse
KYB27445      229 SSPELLEFTKARYVRLRLMGLRGTve-----plPYWFSQDILKEKKLFYTIRDISIVG 281  red flour beetle
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap