Conserved Protein Domain Family
SAA

?
pfam00277: SAA (this model, PSSM-Id:365996 is obsolete and has been replaced by 395215)
Serum amyloid A protein
Statistics
?
PSSM-Id: 365996
View PSSM: pfam00277
Aligned: 25 rows
Threshold Bit Score: 143.971
Threshold Setting Gi: 500031542
Created: 19-Apr-2019
Updated: 18-Jul-2019
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
P42819          4 SFLGEAYEGAKDMWRAYSDMREANFKGADKYFHARGNYDAAQRGPGGVWAAEVI---------------------SNGRE 62  sheep
Q4SI54         22 KFPGQAVRGSHDMYRAYRDMRKANWKNSDKYFHARGNYDAAQRGPGGRWAAKVI---------------------SDARE 80  spotted green ...
Q642J9         22 RFPGEAAGGAKDMWRAYQHMKEANWKNSDKYFHARGNYEAAQRGPGGYWAAKVI---------------------SDGRE 80  zebrafish
15_pfamImport   1 RFMKQFAQGSADMLRAYRDMREANWKNSDKYFHARGNYDAASRGAGGRVAAAVIrifasshmvtmcccscmgfcdSNTWE 80 
Q12LF8         56 lnqRQWIGGAYDFFGNYRDMRDANTIGADKYFHCKANCEATKRGKGGESAACTI---------------------SDSRE 114 Shewanella den...
XP_006642759   22 MFPVEAARGAGDMWSAYDDMREANWKNSDKYFHARGNRDAASRGPGGKWAAEVI---------------------SNARE 80  spotted gar
XP_011679821   37 DFVSGAVRGAGDMWRSYSDMREANTIGADKYFHARGNYEASQRGSGGRFAARVI---------------------SDARE 95  purple sea urchin
XP_002592128   44 DRTREAAQGAGDMYSAYRDMRESNWRNSDKYFHARGNYDAAQRGPGGRWAAEVI---------------------SNARE 102 Florida lancelet
CBL43865      575 DYTVGAIGGAADFVDNYGDMRDANTIGGDKYFHCKANCEAAQRGQGGQDAARCI---------------------SDSRE 633 gamma proteoba...
XP_016154381   32 QFVRDAAGGTRDMYRAYKDMREANYRGADKYFHARGNYDAARRGPGGAWAARVI---------------------SDARE 90  collared flyca...
P42819         63 ALQGITdplfkgmtrDQVrEDTKADQFANEWGRSGKDPNH----------FRPPGLPDKY 112 sheep
Q4SI54         81 WAQQKTg--------RGA-SDSAADQAANRWGRNGGNPNV----------YRPRGLPRRY 121 spotted green pufferfish
Q642J9         81 ALQGLIr--------RGN-SDAAADQEANLWGRNGGDPNK----------YRPKGLPIKY 121 zebrafish
15_pfamImport  81 GIQRARg--------RHA-EDSEADQIANRWGRNGGDPNR----------FRPKGLPSKY 121
Q12LF8        115 WFDQHIk-------gDPA---SAADQAANIFGRSNASSPQscsl--vcsaFRPNGLPQGY 162 Shewanella denitrificans OS217
XP_006642759   81 WWQGSAs-------gRGH-EDTEADQEANRWGRDGGDLSK----------YRPKDLPEKY 122 spotted gar
XP_011679821   96 GWQGGVs-------gRGA-KDTQADQEANRWGRNGGDPNR----------YRPAGLPDGY 137 purple sea urchin
XP_002592128  103 GYQSGLs-------gQGE-VDTRADQEANNWGRNGGDPNR----------YRPEGLPDRY 144 Florida lancelet
CBL43865      634 WFDQHWpk------nDPP-SASAADQVANLYGRTQGAENTggncqqicapFRPNGLPSQY 686 gamma proteobacterium HdN1
XP_016154381   91 NWQSRVs-------gRGA-EDTRADQEANRWGRSGGDPNR----------YRPRGLPSKY 132 collared flycatcher
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap