4FET


Conserved Protein Domain Family
PG_binding_1
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pfam01471: PG_binding_1 (this model, PSSM-Id:366659 is obsolete and has been replaced by 460223)
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Putative peptidoglycan binding domain
This domain is composed of three alpha helices. This domain is found at the N or C-terminus of a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. This family is found N-terminal to the catalytic domain of matrixins. The domain is found to bind peptidoglycan experimentally.
Links
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Statistics
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PSSM-Id: 366659
Aligned: 206 rows
Threshold Bit Score: 36.3346
Created: 24-Apr-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
4FET_B  12 SGEDVIELQSRLKYNgfY-----TG----KVD---GVFGWGTYWALRNFQEKFGLPVDGLAGAKTKQXL 68  Bacillus anthracis
Q74JK3 399 TGVDVATLQQYLTALgyM-----PK----HVT---GVFNDETKNAVIEFQKAHGLTADGIVNGQVQAQL 455 Lactobacillus johnsonii
Q6APC7 238 REKRIISIRKRLQFAgpF-----LEaprdSDL---SQYDLILEEAVLSFQQLHGLQTDGIIGRNTVDAL 298 Desulfotalea psychrophila
Q5LS41 213 GGPRVVALRNRLIAMgfM-----DR----SAV---ASYDGTLQKAVQAFQLAHGLEADGVAGDGTLDEI 269 Ruegeria pomeroyi
Q60A67 224 RHGEVPALRKRLAALgfLwq-esSS----KEP---EVYAGDLVEAVARFQERHGLAPDGVIGKGTLAAL 284 Methylococcus capsulatus
Q5NLM2 165 DNPRVKTLRRRIAIEdkEl----PD----NGS---SHFDAALKAAVKRAQQRYGLNPTGVVSGQTLQAL 222 Zymomonas mobilis
Q9A853 203 TGARVVALEARLAAEdpT------V----AVDa-aPVFDAALTQAVQRAQKRFGLNPNGIVDRATLAAL 260 Caulobacter vibrioides
Q89RI8 117 QGANDDLLRKRLIVSg-------dL----SADkasGAFDQDLADAVKRFQARHGLAPTGMVTPRTLAAM 174 Bradyrhizobium japonicum
Q2YN97 115 nDPAVQYLRKRLMISgdL-----PQe--aGLS---TAFDTYVDAALKRFQARHGLPADGVMGQFTYAAM 173 Brucella abortus 2308
Q8PCX8 114 HGAEVLKLQQTLQQLgyKdakgnEL----NAD---GAYGQRTGEAVKAFQRAHGLQEDGVVGGDTLKAL 175 Xanthomonas campestris pv. campe...
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