5I3E


Conserved Protein Domain Family
DNase_II

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pfam03265: DNase_II (this model, PSSM-Id:367426 is obsolete and has been replaced by 460868)
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Deoxyribonuclease II
Statistics
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PSSM-Id: 367426
Aligned: 115 rows
Threshold Bit Score: 106.598
Created: 6-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5I3E_A    14 RDEQN-RSVDL----WFAYKVPkltkdadsdsasgyeyvyyDRQVGa----------VQKSPNLMNDPKGA-LFYTLDSV 77  Burkholderia thaila...
EFV61812  29 QNAGGnAPVNWltnkSIVYKAP-------------------GQVNGkiiva-gaagnWQDGAGAINAANGHsFAKALEHV 88  Trichinella spiralis
EFV62164  27 kpgdaaADCDV----AIVYKAP-------------------GQNNGkiifa-taagtWDDGAQALSNNAGHsFAKTLEDV 82  Trichinella spiralis
EFV62170  25 QNRAGnGVADW----TVVYKAP-------------------GQATGkiieataaagnWQDGAVLIANDRGHsFATALQHV 81  Trichinella spiralis
EFV50605  29 QNVQGnGNSDW----AILYKPP-------------------GERQGkilip--pgnsWVDNPHPLERDNSHsFAKALENV 83  Trichinella spiralis
EFV62108  26 RQANGgGDIDW----VILYKPP-------------------GEKRGkilvp--aaaaWDAYPQDLHNAADHsFVKTLESV 80  Trichinella spiralis
EFV56241  32 QTHDGnGNVDW----AILYKAA-------------------GQNNGkiita--asanWQQSPTVITGAGGNsFGKALEHV 86  Trichinella spiralis
EFV61652  33 QNAAGgADADW----AILYKAP-------------------AQSNGkvlve-gaaasWAGSPAAVAADNGHsFAKALEHV 88  Trichinella spiralis
EFV62184  41 QDLNGaAPADW----AILYKAP-------------------AQNTGkalig-gaaanWQV-YPAITGLVDHsFGRAVEHV 95  Trichinella spiralis
EFV61761  33 YNLNGgAAADW----VIVYKAP-------------------AQNVGkaliagggavaWQN-TPDLTGVAAHaVVKSLEHV 88  Trichinella spiralis
5I3E_A    78 fgdpgdtTG------WILYNDEmpadaNRSNNATLGHTK------GVIAF-----DiaSsSALWLLHSWPKy-ASPSVPG 139 Burkholderia thaila...
EFV61812  89 -------VGndgtikFLAYNNAp---pRVPKVKTKSNSK------GVIILst--nA--D-AAAWIVHTVPGfpIPKTVYT 147 Trichinella spiralis
EFV62164  83 -------VRnqnnikFLAYNNAp---pGVPSMKTKSNSK------GVIILat--nA--D-SAAWIVHTVPGfpTARTAYS 141 Trichinella spiralis
EFV62170  82 -------VGdnqdvkFLAYNNAp---pGVANVKTKSNSK------GVIILst--tT--D-SAAWIVHTVPGfpAAKTGYS 140 Trichinella spiralis
EFV50605  84 -------AVnqgnikFFAYNNAa---pGVVGVKTRSNSKg----lGVLIIddrpgQ--S-AAAWIVHTVPGfpKPKATYT 146 Trichinella spiralis
EFV62108  81 -------TGthqnkhFFAYNNVa---aGAVGVKTKSNSKg----lSVVILdtsagV--D-SAAWIVHTVPGypIPKVAYT 143 Trichinella spiralis
EFV56241  87 -------AVvdqsakFVAYNNKp---pNAVGVQTNSNSK------GILIMdpnpaT--D-SAAWIIHTVPGfpKALQAYA 147 Trichinella spiralis
EFV61652  89 -------IAanannkFISYNNHp---pDVPKVKTKSSSK------GVLMMdi-tgT--D-AAAWIVHTVPGfpKARTGYL 148 Trichinella spiralis
EFV62184  96 -------VAlnannkFIAYSNVp---pDLPKVKTKSNSK------GV--------T--D-AAAWIVHTVPGfpKALRGYV 148 Trichinella spiralis
EFV61761  89 -------IEanpgnkFIAYNNIp---pDVPKVKTKSNSKelsfylGVLMMnp-nvQ--D-EASWIVHTVPGfpKALRGYV 154 Trichinella spiralis
5I3E_A   140 VPTP--LYGQTFLCLSLDlaTAGKLAAQMaLHQQPQVY---LPrtggLDHTSpLYALTQPLNASAPGDSDSLDFKTrg-- 212 Burkholderia thaila...
EFV61812 148 WPAAetAKGHLLLCLTIPesQINAIAASL-LFIQPMIHyndIPetetAAMPY-FGKLIKGEIPTLPPFTSRGSIRTenag 225 Trichinella spiralis
EFV62164 142 WPVAenARGHLLICLTISksQINAIAASL-LLVQPMVHyndIPetetAGMPY-FNKLAEGKISPLPPFTSRRSIRTedar 219 Trichinella spiralis
EFV62170 141 WPVAenARGHLLICLTISesQINAIAASL-LLVQPLIHyndIPktetAAMPY-FNKLAEGKISTLPPFTSRQTIRTqda- 217 Trichinella spiralis
EFV50605 147 FPQSeyENGHLLICLTIDesQIESIAVAL-FVASPFIYyndLPdaevKIRPA-LKQLLNGETAIKPPFSTKQSIGTeap- 223 Trichinella spiralis
EFV62108 144 FPASeyANGHLLICLTIAesQIEPIAAAL-FMASPFIHyndVPetevRTRPR-LRKLLNGETAVMPPFTTKQNIGTqav- 220 Trichinella spiralis
EFV56241 148 FPAEeiAKGHLFVCLTIKeeQLDVIAHAL-RIVRPLVYhhdIPatevNSRPN-LKNLLNGDSTVLPPLTISNDIKTaas- 224 Trichinella spiralis
EFV61652 149 FPPAevQKGHLLICLTIKedQIDTIALTL-RFATPLIYyndIPdtemNSRPN-LKKLVSGESRVLPPLAVTKDTTTaaa- 225 Trichinella spiralis
EFV62184 149 FPPAeiQKGHLLICLTIKesQIDPIARTL-RIATPLIYhsdIPdtqmNSRPN-LKKLVDGESRFMPPLTVSQEISTen-- 224 Trichinella spiralis
EFV61761 155 FPLAeiQKGHLFICLTIKesEIDGIAMAL-RIATPLIYhndIPdaeiDSRPN-LKKLVNAASRLTPPLTVTRQISTada- 231 Trichinella spiralis
5I3E_A   213 -gVPFKVIAKNRK-WGKDFwndlv-----gptlKADMYVETWIR--GKIPPvlDSDg-VHKTYDIK-FIdlrKLgAPWAW 281 Burkholderia thaila...
EFV61812 226 gpVTVHIYSKSESsKY-EIykkii-----vkslK--KTIKVWSRrdNKLKG--DCRvsQRHIRLITsPA---SV-SGHNT 291 Trichinella spiralis
EFV62164 220 spVAVHIYSKSESsKYGelkwlcefqiilirgfDTLNFIYVWSRrdNILKG--DCRgsQRHIRLIKsPA---AV-RDHNT 293 Trichinella spiralis
EFV62170 218 npVTVHIYSKSKSsKY-EIykkvi-----vkvlK--KTIKVWSRrdNILKG--DCRglQRHIRLIKsPA---VV-VDHNT 283 Trichinella spiralis
EFV50605 224 asVPVQIFGKSGRsKY-EIykkii-----skqlK--KTIKVWSKrdNKLQA--NCKisGRHILLVSsPI---SV-DRQAS 289 Trichinella spiralis
EFV62108 221 psVPVQIFSKSGRsKY-EIyqkii-----srqlK--KTIKVWSRrdKKLKA--NCKipGRHILPVSsPI---SV-DNQAS 286 Trichinella spiralis
EFV56241 225 pgIKATVFSKGEKsGY-EMfkkvl-----srklK--KDLKVWTTrdTKLKG--DCRilGRNIKLITsPI---SV-SGDAS 290 Trichinella spiralis
EFV61652 226 qsLKVTIYSKGEKsRY----------------------VKVWTArdKKLKS--DCRisGKNIRLVTsPI---SV-NGDQS 277 Trichinella spiralis
EFV62184 225 ---------------aqEIykril-----vkrlK--STIKVWTTrdNILKS--DCRkfGRNIKLITsPI---SV-NGDAS 276 Trichinella spiralis
EFV61761 232 agLKVTIYSKGEKsKY-EIyrrvl-----vkklK--TGIKVWTTrdKTLKS--DCRilGRSIKLVTsPI---TI-GDHAS 297 Trichinella spiralis
5I3E_A   282 PETQDHAKWGITTTdnWVCVGDINRmVTQEKRGGGTIAFQDPKLWKA 328 Burkholderia thailandensis E264
EFV61812 292 NLELDETSWAVSDPgnIFCHIDKPYfKDQAKEPSLAVCIENNDIFAR 338 Trichinella spiralis
EFV62164 294 NLEADITNWAVSDPgnIFCHIDKPYfKNQTKEPAMAVCIENNDIFAR 340 Trichinella spiralis
EFV62170 284 NLEADITNWAVSDPgnIFCHIDKPYfKNQTREPAMAICIDNINIFTR 330 Trichinella spiralis
EFV50605 290 NLEKDVTNWLIPDNgdIFCAVDKPYaVSQKAEPAVAICIKQANIFAR 336 Trichinella spiralis
EFV62108 287 SLEKDVTNWLIPENgdIFCAVDKPYaISQKYEPAVAVCIQLASIFAR 333 Trichinella spiralis
EFV56241 291 TFENDVSQWAVTEPgnIFCAIDKPYhRSQRKDPALAVCIDDATIFAR 337 Trichinella spiralis
EFV61652 278 TLENDVSQWLVTETgnKFCAVDKPYqKSQAMEPAMAVCIDDATISAR 324 Trichinella spiralis
EFV62184 277 QLENDDSHWLVSEPgnKFCAVDKPYhKSQAKEPAMAVCIDDATIFTR 323 Trichinella spiralis
EFV61761 298 SLESDVSHWLISDPgnKFCAVDKPYhKSQTKEPAIAVCIDDATIFGH 344 Trichinella spiralis
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