Conserved Protein Domain Family
BEX

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pfam04538: BEX (this model, PSSM-Id:367981 is obsolete and has been replaced by 461346)
Brain expressed X-linked like family
This is a family of transcription elongation factors which includes those referred to as Bex proteins as well as those named TCEAL7. Bex1 was shown to be a novel link between neurotrophin signalling, the cell cycle, and neuronal differentiation, suggesting it might function by coordinating internal cellular states with the ability of cells to respond to external signals. TCEAL7 has been shown negatively to regulate the NF-kappaB pathway, hence being important in ovarian cancer as it one of the genes frequently downregulated in this cancer. A closely related protein, TFIIS/TCEA, found in pfam07500 is involved in transcription elongation and transcript fidelity. TFIIS/TCEA promotes 3' endoribonuclease activity of RNA polymerase II (pol II) and allows pol II to bypass transcript pause or 'arrest' during elongation process. It is thus possible that BEX is also acting in this way.
Statistics
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PSSM-Id: 367981
Aligned: 68 rows
Threshold Bit Score: 57.6499
Created: 5-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ELK23486       1 MEKLCSVNEGM------PENQGKMENE-QPQNaatpevahtledkeksenegkienrgeteneeiledkekpekegkpvt 73  Myotis davidii
XP_006082362   1 MEKLYKENEGK------LEIEGKPEDEvDTEDegksneeekpevegkpeheeklqdqgqlddagkqe------------- 61  little brown bat
EFB22346       1 MEKIYKENERKpenegnLENEGRPEDEvDTEDegksdeeekleveekpghegklqnkgqpddegqpedeg---------- 70  giant panda
XP_004778731   1 MEKLYNENEGK------LEVEGKPEDEvEPEDegksdeeeklevegkpghegklqnkgqpdnggqpedeg---------- 64  domestic ferret
XP_001503090   1 MERVDKENEGKpenqgnSENEGKPEDEvDTEDegksdeegkpavegqpghqgkpqnegqpddeaqpedeg---------- 70  horse
XP_005614418   1 MEKLCNENEGK------LESEGKTQDEvEPEDeeksdeegkpevegqpghqgklqnegqpddeaqpedeg---------- 64  horse
XP_005323467   1 MEKPYRENEGK------LENEEKPEDEvEPEDerksdeeekpdeegkparegkledegepeekgqskdgg---------- 64  thirteen-lined ...
XP_012668625   1 MEKPYSKHEGK------LENEGKPEEDvEPEDeaksdeeekpdveekpecegkledegepdeegqede------------ 62  small-eared galago
XP_008987885   1 MEKPYNKNEGN------LENEGKPEDEvEPDDeekpdvegktecegkredkgepgdegqledegsqe------------- 61  white-tufted-ea...
XP_011809825  49 edegepadEGQ------PEDERSqekqgksegegkpqgegk--------------------------------------- 83  Colobus angolen...
ELK23486      74 egksesqgkskeegkpesegkpkeegkpaiepraagkrpAGDDVPRKAKRKTNKG-LAQCLKEYKEAIHDMHLSNEEMIR 152 Myotis davidii
XP_006082362  62 -----kqsksqgeekacsegkpepqakpesqlraaekrpAEEYVPRKAKQKTDRW-TDDSLKDYQEDLQKRHLGIEERMR 135 little brown bat
EFB22346      71 --kqekqgtsenegkphsegkpeslakpegepraaekrpAEDYVPRKAKRKTDRG-TDDSPKDYQENLQERHLGSEEMMR 147 giant panda
XP_004778731  65 --kqekqgksenegkphgegkpeslakpesepraaekrpAEDYVPRKAKRKTDRG-TDDSPKDYQEDLQERHLGSEEMMR 141 domestic ferret
XP_001503090  71 -kqdkqgksedegkpqggegkresqakpeserraaekrpAEDYVPRKAKRKTDRG-TDDSPKDYQEDLQERHLGSEEMMR 148 horse
XP_005614418  65 -kqdkqgqsedegkpqggegkresqakpeserraaekrpAEDYVPRKAKRKTDRG-TDDSPKDYQEDLQERHLGSEEMMR 142 horse
XP_005323467  65 --kaekqgksegqskppgegkpesqakpasepraaekrpAEDYVPRKAKRKTDRG-TDDSPKDSQEDLQDRHLSSEEMMR 141 thirteen-lined ...
XP_012668625  63 ----gkqgksegegkpqgegktesqakpesqaraaekrpAEDYVPRKAKRKTDRGrTDDSPKDSREDLQERHLSSEEMMR 138 small-eared galago
XP_008987885  62 -----kqgqsegegkpqgedkpasqakpesqpraaekrpAEDYVPRKAKRKTDRG-TDDSPKDSQEDIQGRRLSSEEMMR 135 white-tufted-ea...
XP_011809825  84 ---------------------pasqakpesqpraaekrpAEDYVPRKAKRKTDRG-TDDSPRDSQEDLQERHLSSEEMMR 141 Colobus angolen...
ELK23486     153 EFDEMARVEDEVKKTrQKLGGFMWMQKSLQDPFHPR 188 Myotis davidii
XP_006082362 136 ECGDVSRAQEELRKR-QKTGSFHWMQRDVQDPFFPR 170 little brown bat
EFB22346     148 ECGDMSRAQEELRKK-QKMGGFHWMQRDVPDPFAPR 182 giant panda
XP_004778731 142 ECGDMSRAQEELRKK-QKMGGFHWMQRDVQDPFAPR 176 domestic ferret
XP_001503090 149 ECGDMSRAQEELRKK-QKMGGFHWMQRDVQDPFAPR 183 horse
XP_005614418 143 ECGDMSRAQEELRKK-QKMGGFHWMQRDVQDPFAPR 177 horse
XP_005323467 142 ECADVSRAQEELRKKqQKMGSFHWMQRDAQDAFNPR 177 thirteen-lined ground squirrel
XP_012668625 139 ECGDVSRAQEELRKK-QKMGGFHWMQRDVQDSCAPR 173 small-eared galago
XP_008987885 136 ECGDVSRAQAELRKK-QKMGGFHWMQRDVQDSFApr 170 white-tufted-ear marmoset
XP_011809825 142 ECGDVSRAQEELRKK-QKMGGFHWMQRDVQDPFAqg 176 Colobus angolensis palliatus
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