Conserved Protein Domain Family
Dynactin_p62

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pfam05502: Dynactin_p62 (this model, PSSM-Id:368474 is obsolete and has been replaced by 428497)
Dynactin p62 family
Dynactin is a multi-subunit complex and a required cofactor for most, or all, of the cellular processes powered by the microtubule-based motor cytoplasmic dynein. p62 binds directly to the Arp1 subunit of dynactin.
Statistics
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PSSM-Id: 368474
Aligned: 26 rows
Threshold Bit Score: 618.966
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAL00637      57 PPEQLLYCEDCHQIKCPRCITEEIVCWYCPNCLFETPSSMVRSEGNRCARNCFNCPICTAPLGVNTLENVVt-------- 128 Aspergillus niger
EKG17112      57 PLEHLLYCEDCHQIRCPRCVSEEVITWFCPSCLFEVPSSNVRSDGNRCMRSCYNCPVCTAPMIVNSLDSENekharlgeg 136 Macrophomina ph...
EMD60577      53 PLEHLLYCEDCLQIRCPRCVIEETLNWYCPSCLFEVPSSVVKSDGNRCTRNCFNCPVCISPMIVNLLENPDvd------- 125 Bipolaris sorok...
XP_003835083  56 PLEHLLYCEDCQQIRCPRCVIEETLNWYCPHCLFEVPSSVVKSDGNRCTRNCFNCPICISPLIVNVLDNPDrp------- 128 Leptosphaeria m...
GAD96698      68 PPEQLLYCEDCHQIKCPRCITEEIVCWYCPNCLFETPSSMVRSEGNRCARNCFNCPICTAPLAVTTLEN-Ta-------- 138 Byssochlamys sp...
XP_002374707  69 PPEQLLYCEDCHQIKCPRCITEEIVCWYCPNCLFETPSSMVRSEGNRCARNCFNCPICTAPLAVTTLEN-Vt-------- 139 Aspergillus fla...
Q4WXU4        68 PPEQLLYCEDCHQIKCPRCITEEIVCWYCPNCLFETPSSMVRSEGNRCARNCFNCPICTAPLAVNTLEN-Va-------- 138 Aspergillus fum...
EGE02358      61 PPEHLLYCEDCHQIKCARCITEEIVCWYCPNCLFETPSSMVRSDGNRCARNCFNCPICTSPLTVTTLSNAEn-------- 132 Trichophyton eq...
EFW20355      61 PPEHLLYCEDCHQIKCPRCITEEIVCWYCPNCLFETPSSMVKSEGNRCTRNCFNCPICTSPLAVSTVGNGDg-------- 132 Coccidioides po...
EEQ84309      66 PPEHLLYCEDCHQIKCPRCITEEIVCWYCPNCLFETPSSMVRSEGNRCARNCFNCPICTSPLSVTTLGSAD--------- 136 Blastomyces der...
CAL00637     129 -gGTSQQGPWVLSCGYCMWSTLDIGIKFDKPTNIRTQLSKMTEitPARSRQMSRTFgdlKSPLSTYssidehfpppgenk 207 Aspergillus niger
EKG17112     137 geAVQPPGPFYLACPYCQWSTLEIGVEFEKPNNISGQLARLAN--GGKTVPTLRERekaRDRRKEAeesg--------kk 206 Macrophomina ph...
EMD60577     126 ---hsTTDRHILACPYCHWSTVETGIEFEKHTGVYSQISRIAN--GGKPIPSIKERdkeRERRKELeaqrrds-rnpqas 199 Bipolaris sorok...
XP_003835083 129 ---pgTGDRHILACPYCHWSTIETGIEFEKHTGVYAQISRIAN--GGKPIPTLKERdkeRERRKDHearsret-glpssp 202 Leptosphaeria m...
GAD96698     139 -aGGSHQGPWVLACQYCMWTTLDIGIKFDKPTNIRTQLAKLTE--AAGGRKTARGIsdmKSPLASFssatdlp-amgese 214 Byssochlamys sp...
XP_002374707 140 -gGGSQQGPWVLSCGYCMWTTLDIGVKFDKPTNIRTQLSKMTD--SSRGRQMSKTFsdlKSPLSTYssiddqfpspsemr 216 Aspergillus fla...
Q4WXU4       139 -gSEGQQGPWVLSCAYCMWSSLDIGIKFDKPTNICTQLSKMTNttTARGRQMSKSVcelKSPLSTYstiddqfpapgesr 217 Aspergillus fum...
EGE02358     133 --GASQSGPWILSCSYCMWTSLDIDIKFDKPTNIRAQLLSLKN--GANRRPSEARAsqfKSPLASFastptl----peee 204 Trichophyton eq...
EFW20355     133 -nGSSQNGPWILTCSYCMWTTLDIGIKFDKPTNIRSQLSSIFK--GTDRRESIARPshmRSPLSSFsslqdia-dgpspq 208 Coccidioides po...
EEQ84309     137 --NGAQNGPWILSCGYCMWTTLDIGIKFDKPTNIRAQLTSLSN--GQN-----RSSpeiKSPLANLtspddgt--gldsq 205 Blastomyces der...
CAL00637     208 pED---SPLDq--pSAPLTPDARFHALKNFYKNQISATSsSPTDPL-GMDFGSGFSSPGALNRIMSLYTSssrlsslyGG 281 Aspergillus niger
EKG17112     207 pDEe--EEVDihddHSPLDYDMRFSNLSAFYKSQLQTDTm-------GGGYGGDYGSSSTLSRIMSMYSG---------G 268 Macrophomina ph...
EMD60577     200 sRg---SAIVhaggYEPPSRDDLFANLAAFYKAELDAQ--TPSNPLe-----MNFSSPTAYSRIMNLYST---------S 260 Bipolaris sorok...
XP_003835083 203 tDDfmtNPAD----SEPLSREDLFSNLSAFYKSQLEAQ--APSNSLfAAGD-MNFSSPSAYTRIMNLYST--------TT 267 Leptosphaeria m...
GAD96698     215 dEGk--EPRPmd-eQPPLDQDARFDALKSFYRNQIAETSsSPSDPL-GTDFGAGFSSPSALNRIMSLYTSstfg-glyGA 289 Byssochlamys sp...
XP_002374707 217 gDDa--SPANeq-sSGPLNPEARFQALKGFYKSQIASTSsLPNDPL--ADFGAGFSSPGALNRIMSLYTSssrlgnlyGG 291 Aspergillus fla...
Q4WXU4       218 dGQs--TPSGdq-sAAPLTSDGRFSALKAFYKDQIAATStSPTDPL-GTDFGPGFASPGALNRIMSLYAAssrlsslyGS 293 Aspergillus fum...
EGE02358     205 qDEklgSPMSfd-nKPALGHDARFTALKNFYRTQIAETSsSPSDHLiGGDFGL-YSSPNALSRIMSLYNTgvg---mhGN 279 Trichophyton eq...
EFW20355     209 dEHqtqGALSed-sQSSLNHDARFAALKSFYRSQLAETTsSP-DPLiGPELGS-YSSPSALSRIMSLYASglg--glhGS 283 Coccidioides po...
EEQ84309     206 dERlagTAFSee-kPATIDPESRFSALKSFYRNQLTETStSPTDPLvGPELGGFYSSPSALNRIMSLYTAgig--nlhGA 282 Blastomyces der...
CAL00637     282 ANKKPKTKPPVMREALTASEGLKIPSpDAEDTLIQRMSSPdcGWDGLASIEQRGFQSPDA-RFVEDLLPLPVLLRTKRSK 360 Aspergillus niger
EKG17112     269 SKKLKKDRPSAMREAFGSDEGFQVHNaSSEEETIKRMRQV--GWEGTIAPDQRRSQTQDDiRFAADLRPVPTLLRTKRAK 346 Macrophomina ph...
EMD60577     261 TKKSKRNKPTPMRDAASELEGLVTHDpAAENAAIERIKRG--GWSATLSPTQKLAQLDPHvQFDDELRPIPTLLCTKRSK 338 Bipolaris sorok...
XP_003835083 268 AKKQKRNKPSPMREAASELEGLAIHDpASDIAAIERIKRD--GWASTLSTTQKLEQINPHiRFEDELRPVPTLLCTRRTK 345 Leptosphaeria m...
GAD96698     290 GGKKPKSKPPVMREALTASEGLKIPSpDFEESVIHRMSSDecGWDGLASMEQRAFQAPDA-RFVEDLRPLPVQLRTKRSK 368 Byssochlamys sp...
XP_002374707 292 TNKKPKSKPPVMREALTTSEGLRVPApDAENALIRRMASDdcGWDGMASIEQRTFQSPDA-RFVEDLLPLPVLLRTKRSK 370 Aspergillus fla...
Q4WXU4       294 ANKKPKSKPPVMREALTASEGLKVATpGAEDAIIQRISSEvcGWDGLASIEQRMFQSPDV-RFVEDLLPLPVLLRTKRSK 372 Aspergillus fum...
EGE02358     280 -NKKSKSKPPVMREALTQTEGLIIPTtGSEDHIIEKMAAE--GWDGLASMEQQQFQQPST-RFVDDLLPLPVLLRTKRSK 355 Trichophyton eq...
EFW20355     284 GAKKAKSRPPVMREALTQSEGLHIPPaGAESATVQKMATE--GWDGLASMEQRLFQLPGT-RFVDDLCPLPAFLRTKRSK 360 Coccidioides po...
EEQ84309     283 GSKKPKSKPPVMREALTPAEGLHIPDpNTEQAIIQKMASPdcGWDGLASVEQKVSQPPST-RFVDELRPLPVLLRTKRSK 361 Blastomyces der...
CAL00637     361 RCKSCKHILVKPELKPQSTRFRIRLIALSYIPLPTLRPLNPSPSpattttttTVLP--TPSSSttnp------------- 425 Aspergillus niger
EKG17112     347 RCRTCRHILARPETKISSSRYKIKLLALNNIPQISLKALPRHSE--------TSTPsaPSVlpfd--------------- 403 Macrophomina ph...
EMD60577     339 RCRSCRHILAKPESKITSTRYKIKLLALNHIPRLSVRALPP-----------PSNPpvPAFPGsvpapapqsaqpqpqlp 407 Bipolaris sorok...
XP_003835083 346 RCRSCRQIVAKPESKITSTRYKIKILALSHIPRISIRALP------------ATNPgqPSTSVqspai------------ 401 Leptosphaeria m...
GAD96698     369 RCKACKHILVKPEFKPQSTRFRIRLIALSYIPLPTLRPLTPTSH--------AGIP---LSPTvapp------------- 424 Byssochlamys sp...
XP_002374707 371 RCKSCKHILVKPEFKPQSTRFRIRLIALSYIPLPTLKPLVPSPF--------AGLP---SVTSgaap------------- 426 Aspergillus fla...
Q4WXU4       373 RCKSCKHILVKPELKPQSTRFRIRLIALSYIPLPTLRPLALGPP--------TGLPaiTPSASssap------------- 431 Aspergillus fum...
EGE02358     356 RCKACKHILVKPEVKPQSTRFRIRLIALSYLPLTSIRPLYPSP---------VALPinl--------------------- 405 Trichophyton eq...
EFW20355     361 RCKACKHILVKPEFKPQSTRFRIRLIAISYIPLTNLRPIVPLP---------PTPPvnl--------------------- 410 Coccidioides po...
EEQ84309     362 RCKACKHILVKPEFKPQSTRFRIRLIALSYIPLTIMRPLPPFPA--------SSPPvnl--------------------- 412 Blastomyces der...
CAL00637     426 -nldaLSPLRPIQLLLTLKNHMFDPVRVTLATPSVTPGRVASKVTILCPQFDIGANSDVWDEALQgtsatttttaAAGTg 504 Aspergillus niger
EKG17112     404 --ynkLQPFMANHFILTIRNPLFDPIRVTLATPAITPGRIASKVTVLCPEFEVGANTDVWDEALTgs------gaTQRKs 475 Macrophomina ph...
EMD60577     408 fnynaLRPGIPAHFLLHLSNPLFDPIRVTLATSSTTPGRVSSRVTILCPEFEVGANTDVWDDALS-----------SSPa 476 Bipolaris sorok...
XP_003835083 402 -nytaLRSGVATHFLLTLSNPLFDPIRVTLATSSLTPGKVQSRVTILCPQFDIGKNTDVWDDALS-----------STVa 469 Leptosphaeria m...
GAD96698     425 -dldaLPPLRPIQYLLTLKNHMFDPVRATLATPSLTPGRVATKVTILCPQFDIGANSDVWDEALQ-----------ASTa 492 Byssochlamys sp...
XP_002374707 427 -nldaLSPLKTVQLQLTLKNHMFDPVRVTLATPSVTPGRVASKVTILCPQFDIGANSDVWDEALQgs----------tAp 495 Aspergillus fla...
Q4WXU4       432 -nldaLPPLKPFQLLLTLKNHMFDPVRVTLATPSVTPGRVATKVTILCPQFDIGANSDVWDEALQgt----------tTg 500 Aspergillus fum...
EGE02358     406 ---eaLEPLKPIQFLLTLKNHMFDPIRVTLATPSVTPGPVSTKVTILCPQLEVGANTDVWDEALQ-----------SGNm 471 Trichophyton eq...
EFW20355     411 ---daLEPLKPVQLLLTLKNHMFDPIRVTLATPSVTPGRVASRVTILCPEFEVGANTDVWDEALQ-----------SSSa 476 Coccidioides po...
EEQ84309     413 ---daLEPGRPVQFLITLKNHMFDPIRITLATPSVTPGRVESKVTMLCPQFEVGANSDVWDEALA-----------SSAa 478 Blastomyces der...
CAL00637     505 tdpRGSRSGglg-vyEKVAEAGKVWDKGRNWTTVVLEVVPGTLp---gDSDPNQQLQPDE 560 Aspergillus niger
EKG17112     476 qppSSIELGas--npATQAEAGKVWERGRNWTSVILEVVPDKAdp----aDLEGGLDEDE 529 Macrophomina phaseolina MS6
EMD60577     477 pmpRRSTINa----eTGQIEAGKIWDKGRNWTSVAIEVIPGFLde---vNGEEEELEPDD 529 Bipolaris sorokiniana ND90Pr
XP_003835083 470 perRGSLLNa-----DGQIEAGKVWDKGRNWTTVAIEVVPGFLkpttgFGSVEEELDEDD 524 Leptosphaeria maculans JN3
GAD96698     493 a-dRSSRAAlagfgtEKVAEAGKVWDKGRNWTTVVLEIVPGTLp---gEGDKSDdnnnrh 548 Byssochlamys spectabilis No. 5
XP_002374707 496 gdaRASRSGtlg-stEKVAEAGKVWDKGRNWTTVVLEVVPGTLpg--gGATGRNRMKQHY 552 Aspergillus flavus NRRL3357
Q4WXU4       501 gdnRSSRSGgmnlgyEKVAEAGKVWDKGRNWTTVVLEVVPGTLp---gGSLGTRRRQSLG 557 Aspergillus fumigatus
EGE02358     472 pdpRSSRHGg----aERVAEAGKVWDKGRNWTTVAMEVVPGTIk---nKNKQAQQDMDDE 524 Trichophyton equinum CBS 127.97
EFW20355     477 pdpRSSRSGv-----EKVAEAGKVWDKGRNWSTVAMEVVPGSL-----ADLGESGLTEDE 526 Coccidioides posadasii str. Silveira
EEQ84309     479 qdpRSSRSGl-----DKVAEAGKIWDKGRNWTTVAMEVVPGSL-----PDLAPGEEDEDE 528 Blastomyces dermatitidis ER-3
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