3EBQ


Conserved Protein Domain Family
Peptidase_C97

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pfam05903: Peptidase_C97 (this model, PSSM-Id:368660 is obsolete and has been replaced by 461775)
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PPPDE putative peptidase domain
The PPPDE superfamily (after Permuted Papain fold Peptidases of DsRNA viruses and Eukaryotes), consists of predicted thiol peptidases with a circularly permuted papain-like fold. The inference of the likely DUB function of the PPPDE superfamily proteins is based on the fusions of the catalytic domain to Ub-binding PUG (PUB)/UBA domains and a novel alpha-helical Ub-associated domain (the PUL domain, after PLAP, Ufd3p and Lub1p).
Statistics
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PSSM-Id: 368660
Aligned: 31 rows
Threshold Bit Score: 81.9674
Created: 5-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3EBQ_A      9 YPVKLYVYDLS---KGLARRL-------------SPIMLGKQLEGI--WHTSIVVHKD-EFFFg----------sGGIS- 58   human
O56042   1040 HSYATISYDYVlpkTGGNRRVlcfagvgdpnpynLP--TGDKNVGIgsYMVEFDIIGL-DKDTgvkvmrpvpwkqCGYTe 1116 Rice ragged stunt...
Q8LN31      2 KEVVLHVYDVTnsdSEKTNNTilqi------nriFKDRIG--LGGI--FHSAVQVYGEeEWSFgfc------engSGVF- 64   Japanese rice
Q9SZZ4      2 AEVVLHIYDVTnsgSEKTNNTivqi------nrfFKDGIG--LGGI--FHSAIQVYGNdEWSYgyc------eqgTGVF- 64   thale cress
Q7SF35     22 TEILINVYDLL---PPGRISS-------------TLWFLG--T-SL--LHSGVVINGR-EYAYgght----hrgkTGVY- 74   Neurospora crassa
Q8X1T0      1 MKVYINVYDLMpdsPVNK----------------LAWTLGL---GI--YHTGLVLEGK-EYAFgahe----ipgsTGVF- 53   Schizosaccharomyc...
O49393     17 VPVYLNVYDLTpmnV-------------------YGYWLGI---GI--YHSGLEVHGV-EYGYgahe-----kssSGIF- 65   thale cress
Q6NQ19     18 VPVYLNVYDLTpinG-------------------YAYWLGL---GI--YHSGVEVHGV-EYGFgahd-----hstTGIF- 66   thale cress
Q8LA90     15 VPVYLNVYDLTpinG-------------------YAYWLGL---GV--YHSGVEVHGI-EYAYgahe-----ypsTGIF- 63   thale cress
SOV77056   44 NMVYLNIYDLDsvsKVVNTVA-------------RSVGAGA-------FHAGVEVYGY-EYSFgyim-----dgeTGVT- 96   Plasmodium sp. go...
3EBQ_A     59 -----------------SCPPGGt----LLG-PPDSVV-----DVGSTEVTEEIFLEYLSSLGESlFRGEAYNLFEHNCN 111  human
O56042   1117 eqvwsiyktlgkeyrkvELKPYTvedawRVIaKSSHKRvlsdkAIISTPISYERQRAIEYMLSS---HGFDYNLVLNNCQ 1193 Rice ragged stunt...
Q8LN31     65 -----------------SCPIGK-----NPMyTYRECI-----VLGETECSIATVNRILRELSRE-WPGHSYDLLSRNCN 116  Japanese rice
Q9SZZ4     65 -----------------SCPSGK-----NPMyTYREKI-----VLGKTDCTIFMVNQILRELSRE-WPGHTYDLLSKNCN 116  thale cress
Q7SF35     75 -----------------WTAPRTe----PPGgTFRCEL-----LHGFTLATPAEIDAIIREASEE-FLGTAYNLLTKNCN 127  Neurospora crassa
Q8X1T0     54 -----------------ATMPRPp----LEGcRWRCSI-----ALPNCTLPKPDVDRILIRLSQE-FTGLSYSLLERNCN 106  Schizosaccharomyc...
O49393     66 -----------------EVEPKK-----CPGfTFRKSI-----LVGETEMKAKEVRSFMEKLSEE-YQGNKYHLITRNCN 117  thale cress
Q6NQ19     67 -----------------EVEPKQ-----CPGfTFRKSI-----LIGRTDLDPENVRVFMEKLAEE-YSGNSYHLITKNCN 118  thale cress
Q8LA90     64 -----------------EGEPKQ-----CEGfTFRKSI-----LIGKTDLGPLEVRATMEQLADN-YKGSSYNLITKNCN 115  thale cress
SOV77056   97 -----------------KTNARY-----HPYhVYRETI-----PMGKTPLTKEEVDLLVEVMKLQ-WIGDTYDILSRNCL 148  Plasmodium sp. go...
3EBQ_A    112 TFSNEVAQFLTGRKIPSYITDLPSEVLSTPFgqalRPLLD 151  human
O56042   1194 DFTRGLFDYARGGPVPDFIENDVRIAMIHSTsr---hfAE 1230 Rice ragged stunt virus (isolate Thailand)
Q8LN31    117 HFCDVLCERLAVPKLPGWVNRFANAGDTAVVvaenTAVKF 156  Japanese rice
Q9SZZ4    117 HFCDVLCDRLGVPKIPGWVNRFAHAGDTALEvagnTAMRV 156  thale cress
Q7SF35    128 HFTSHLCQKLTGLPGPAWLNRAASIGV---AlpcmVPKDW 164  Neurospora crassa
Q8X1T0    107 HFTNAAAIELTGSPIPSFLNRISRIGLAFPTi---TNALL 143  Schizosaccharomyces pombe 972h-
O49393    118 HFCNHVSLKLTHKSIPSWVNRLARLGF---LcncvLPACL 154  thale cress
Q6NQ19    119 HFCNDVCVQLTRRSIPSWVNRLARFGL---FcncvLPAEL 155  thale cress
Q8LA90    116 HFCDETCIKLTGNPIPSWVNRLARIGF---McncvLPATI 152  thale cress
SOV77056  149 NYADYFCNLLDVGGIPEWVMSLQKKVT---WvksnINIAa 185  Plasmodium sp. gorilla clade G3
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