Conserved Protein Domain Family
EMI

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pfam07546: EMI (this model, PSSM-Id:369419 is obsolete and has been replaced by 462204)
EMI domain
The Pfam alignment is truncated at the C-terminus and does not include the final cysteine defined in Callebaut et al. This is to stop the family overlapping with other domains.
Statistics
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PSSM-Id: 369419
Aligned: 120 rows
Threshold Bit Score: 29.2695
Created: 4-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_014325239  63 NHCAYmvqKNITCILQDGVETYVKAEYt-------------tKCIwgqkcpviMYRTFHRP----TYKVGYK--TVTELE 123 southern platyfish
NP_001292610  29 RTCAA----EPRSRTATHTESHVQPVYlpyltt----cqghrLCS--------TYRTIYKV----AYRQVYK--QVPQPV 86  chicken
XP_016158043  28 RVCSA----GPPSRPSAHAESHVQPVYqpyltt----cqgqrLCS--------TYRTIYRV----AYRQRYR--QAPEPT 85  collared flycat...
XP_005987461  29 RICSE----SKQRVSVTYMESYVQPVYkpyitv----cegqrLCS--------TYRTTYKI----AHRQVYK--HVPKPV 86  coelacanth
EDW30305     104 HICVQ---QRTITMPVKTTEVYTRPTWkhvstpcqpqsysgqMCT--------RVQVVHEP----AYRDVIKhkTAQQMT 168 Drosophila pers...
EFX77221     236 HVCTH---EETITRPIRVVESYCKPAYksftqr----csngtMCT--------AFRVQYDT----IYRTVVKyqTTTEKK 296 common water flea
XP_008123190  29 KACSV----EVRSRTTSYLTSHIQPVYqpyltl----cqgyrLCS--------KYRTAYKVsqrpAYRKISQ------PI 86  green anole
CAG05208      29 RVCGP----DLRYSIVMVTESYVQPVHkpyitl----cqghrLCS--------TYKTAYSV----RYRQVSKa-APSSPV 87  spotted green p...
XP_023194217  29 RACSG----DLRHNVILATESYAQPVHkpyitl----cqghrLCS--------TYKTTYSL----AYRQVSRi-ASASHF 87  southern platyfish
XP_011479804  27 RVCQK----DVRHNVVMVTESYVQPVHkpyitv----cqghrLCS--------TYKTTYSL----AYRQVSRt-VSTSHS 85  Japanese medaka
XP_014325239 124 WK-CCPGYS 131 southern platyfish
NP_001292610  87 AS-CCPGWS 94  chicken
XP_016158043  86 AS-CCPGWS 93  collared flycatcher
XP_005987461  87 YG-CCPGWR 94  coelacanth
EDW30305     169 YD-CCTGWS 176 Drosophila persimilis
EFX77221     297 HA-CCPGWT 304 common water flea
XP_008123190  87 YT-CCPRWK 94  green anole
CAG05208      88 YPeCCPGWR 96  spotted green pufferfish
XP_023194217  88 YPdCCPGWR 96  southern platyfish
XP_011479804  86 VPeCCPGWR 94  Japanese medaka
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