1L3E


Conserved Protein Domain Family
HIF-1a_CTAD

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pfam08778: HIF-1a_CTAD (this model, PSSM-Id:370116 is obsolete and has been replaced by 430212)
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HIF-1 alpha C terminal transactivation domain
Hypoxia inducible factor-1 alpha (HIF-1 alpha) is the regulatory subunit of the heterodimeric transcription factor HIF-1. It plays a key role in cellular response to low oxygen tension. This region corresponds to the C terminal transactivation domain.
Statistics
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PSSM-Id: 370116
Aligned: 12 rows
Threshold Bit Score: 65.8983
Created: 4-May-2019
Updated: 18-Jul-2019
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1L3E_A         5 ESGLPQLTSYDCEVNAPIQGSRNLLQGEELLRALDQV 41  human
Q6EHI4       740 SGGLPQLTRYDCEVNAPVQDRHHLLQGEELLRALDQV 776 zebrafish
XP_005161407 620 LLTLPVLSGWECEVNAPLEHTSYLLQGTEIMAVLDQV 656 zebrafish
XP_003758350 825 PYLLPELTRYDCEVNVPVPGSSTLLQGSELLRALDQA 861 Tasmanian devil
XP_014450632 834 ESGLPQLTSYDCEVNAPIQGNRNLLQGEELLRALDQV 870 American alligator
XP_018666946 698 SGILPELSLHDCEVNAPLPGRGFFPVGVECVHALDEV 734 vase tunicate
AAH93209     617 LLTLPVLSGWECEVNAPLEHTSYLLQGTEIMAVLDQV 653 zebrafish
XP_005996095 738 DSVLPDITSYECGAASPLQSSRHLIQVEDLLRVLDQT 774 coelacanth
XP_011601354 817 STCLPELTRYDCEVNVPLQGNLHLLQGCDLLRALDQA 853 torafugu
XP_005988922 765 fSVLPVLNSLDCEVNAPVHGRSRLLQGNELLRVLDQA 801 coelacanth
CAG10537     545 LFSLPQLTRDDCEVNAPLQGRQYLLQGEELGAPWTTS 581 spotted green pufferfish
XP_003962523 718 LFSLPQLTRDDCEVNAPLQGRQFLLQGEELLRALDHV 754 torafugu
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