1OMX


Conserved Protein Domain Family
Glyco_transf_64

?
pfam09258: Glyco_transf_64 (this model, PSSM-Id:370389 is obsolete and has been replaced by 430488)
Click on image for an interactive view with Cn3D
Glycosyl transferase family 64 domain
Members of this family catalyze the transfer reaction of N-acetylglucosamine and N-acetylgalactosamine from the respective UDP-sugars to the non-reducing end of [glucuronic acid]beta 1-3[galactose]beta 1-O-naphthalenemethanol, an acceptor substrate analog of the natural common linker of various glycosylaminoglycans. They are also required for the biosynthesis of heparan-sulphate.
Statistics
?
PSSM-Id: 370389
Aligned: 22 rows
Threshold Bit Score: 255.674
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1OMX_A        30 FTLIMQT--YNRTDLLLRLLNHYQAVPSLHKVIVVWNNvgEKGPEEL-----------WNSLGPHpIPVIFKPQTANKMR 96  house mouse
Q9LY62        74 YTLLMNT--WKRYDLLKKSVSHYASCSRLDSIHIVWSE--PNPPSESlkeylhnvlkkKTRDGHE-VELRFDINKEDSLN 148 thale cress
Q9JKV7       412 FSAVIWV--GASGESLLKLIQEVAGSRHCAQILILWNS--EKLPP-------------DRWPETA-VPLTVIKGHRKV-S 472 house mouse
Q08C36        66 FTIIMQT--YNRTDVLLRLLNHYQAVPHLQCIIIVWNNp-GETPPRRl----------WDELGPHpVPVLFREQRVNRMR 132 zebrafish
Q28F88        60 FTLIMQT--YNRTDLLLKMLNHYQAMPGLSHVIVVWNNv-GQDTPQEl----------WESFGPHpVPVTFKKQKVNLMR 126 tropical clawed...
Q3TSR0        53 FTLIMQT--YNRTDLLLRLLNHYQAVPSLHKVIVVWNNv-GEKGPEEl----------WNSLGPHpIPVIFKPQTANKMR 119 house mouse
Q9C975        48 ITVLINGysEYRIPLLQTIVASYSSSSIVSSILVLWGN--PSTPDQLldql----yqnLTQYSPGsASISLIQQSSSSLN 121 thale cress
Q84WB7       518 FTLATMTy-DARLWNLKMYVKRYSRCPSVKEIVVIWNK---GPPPDL-----------SELDSA--VPVRIRVQKQNSLN 580 thale cress
XP_015650243  49 LTVLLSGysERRLPLLRAIAGAYAAHPLVLAVVVLWSN--PSTPDSL--------------LSSFpPAVTLHRTASASLN 112 Japanese rice
NP_001125331 383 FSALIWV--APPGQPPLKLIQAVAGSQHCAQILVLWSN--ERPLP-------------SRWPETA-VPLTVIDGHRKV-S 443 Sumatran orangutan
1OMX_A        97 NRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQ--QFPDQIIGFVPRKHV-ST---SSGIYSYGGfelqtpgpgNGD 170 house mouse
Q9LY62       149 NRFKEIKDLKTDAVFSIDDDIIFPCHTVDFAFNVWE--SAPDTMVGFVPRVHWpEKsndKANYYTYSGwws----vwWSG 222 thale cress
Q9JKV7       473 NRFFPYSNISTNVILSLDAQSTLSTSEVDFAFVVWQ--SFPERMVGFLSGSHF-WDe--AQGGWGYRTg--------MTN 539 house mouse
Q08C36       133 NRLMMHPDVKTDAVLMLDDDILLSVPDISFAFSVWK--QFPDQIVGFVPRKHV-SS---ASGVYSYGSfelqdpdkgGGD 206 zebrafish
Q28F88       127 NRLQSFPEIQTQAVLMMDDDTLVSAYDISFAFSIWQ--QFPDRIVGFVPRKHV-SS---PSGIYSYGSfelkaphteTGD 200 tropical clawed...
Q3TSR0       120 NRLQVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQ--QFPDQIIGFVPRKHV-ST---SSGIYSYGGfelqtpgpgNGD 193 house mouse
Q9C975       122 ARFLPRSSVDTRAVLICDDDVEIDQRSLEFAFSVWK--SNPDRLVGTFVRSHG-FDl--QGKEWIYTV---------HPD 187 thale cress
Q84WB7       581 NRFEIDPLIKTRAVLELDDDIMMPCDDIEKGFRVWR--EHPERLVGFYPRF--------VDQTMTYSAekf----arSHK 646 thale cress
XP_015650243 113 SRFLPHPSIRTAAVAVADDDVLPDAAALSFAFAAWQqrARPGTLVGFFPRSHH-LDl--ARGRWAYGAaa------rQQA 183 Japanese rice
NP_001125331 444 DRFYPYSTIRTDAILSLDARSSLSTSEVDFAFLVWQ--SFPERMVGFLTLSHF-WDe--AHGGWGYTAe--------RTN 510 Sumatran orangutan
1OMX_A       171 QYSMVLIGASFFNSKY-LELFQ---K-QPAAVHALIDETQNCDDIAMNFLVTRHTGKPSgi-fVKPInmvnlekETN-G- 242 house mouse
Q9LY62       223 TYSMVLSKAAFFHKKY-LSLYT---NsMPASIREFTTKNRNCEDIAMSFLIANATNAPA----IWVK-------GKIyEi 287 thale cress
Q9JKV7       540 EFSMVLTTAAFYHRYY-HTLFT---HsLPKALRTIADETPTCVDVLMNFLVATVTKLPP----IKVPygrqhpeAVPmDs 611 house mouse
Q08C36       207 RYSMILVGASFFHRRF-LKQFQ---E-QPAEVHTLLDRTQNCDDIAMNFIVARQLSKRPsgvfVKPVhmsnlekDASsG- 280 zebrafish
Q28F88       201 MYSMILIGAAFFHSDY-LRLFE---Q-LPASVHNMIDQTQNCDDIAMNFMVANHLGKASgv-lVKPTdmrnlekEAGsG- 273 tropical clawed...
Q3TSR0       194 QYSMVLIGASFFNSKY-LELFQ---K-QPAAVHALIDETQNCDDIAMNFLVTRHTGKPSgi-fVKPInmvnlekETNg-- 265 house mouse
Q9C975       188 KYSIVLTKFMMMKQDY-LFEYSckgGvEMEEMRMIVDQMRNCEDILMNFVAADRLRAGPi--mVGAErvrdwgdARNeEv 264 thale cress
Q84WB7       647 GYNMILTGAAFMDVRFaFDMYQ---SdKAKLGRVFVDEQFNCEDILLNFLYANASGSGKaveyVRPSlvt-idtSKFsG- 721 thale cress
XP_015650243 184 RYSMVLTKLLVLGAGL-LREYSc--SpELAAARAVVDRERNCEDILMNFVAAEESGEGPv--lVEAGsirdwgdPRNdDa 258 Japanese rice
NP_001125331 511 EFSMVLTTAAFYHRYY-HTLFT---HsLPKALRTLADEAPTCVDVLMNFIVAAVTKLPP----IKVPygkqrqeAAPlAp 582 Sumatran orangutan
1OMX_A       243 ------------YSGMWHRAE--HFLQRSYCINKLVNIYDGMPLKYSNIMI--S 280 house mouse
Q9LY62       288 -----------gSTGISSIGG--HTEKRTHCVNRFVAEFGKMPLVYTSMKAvdS 328 thale cress
Q9JKV7       612 -----------gDPRPVPEPQ----PLDQDCINRLAAGFGHMPLVSSQVRL--D 648 house mouse
Q08C36       281 ------------FVGMWHRPE--HMLQRSYCLNKLAQIYGHMPLRYSNIMI--T 318 zebrafish
Q28F88       274 ------------YTGMWHRAE--HLLQRSFCLNKLAEIYSTMPLKYSSIMI--S 311 tropical clawed frog
Q3TSR0       266 ------------YSGMWHRAE--HFLQRSYCINKLVNIYDGMPLKYSNIMI--S 303 house mouse
Q9C975       265 ee-------rvrDVGLSSRRVe-HRKRRGNCIREFHRVMGKMPLMYSYGKVv-N 309 thale cress
Q84WB7       722 -------------VAISGNTNq-HYRKRSKCLRRFSDLYG--SLVDRRWEFggR 759 thale cress
XP_015650243 259 dagagaggeemkAVGLSSTGGaaHWEKRGDCITEFHRLLGRMPLRYSYGKVvaa 312 Japanese rice
NP_001125331 583 -----------gGPGPRSKPQ----APAPDCINQIAAAFGHMPLLSSCLRL--D 619 Sumatran orangutan
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap