Conserved Protein Domain Family
Tau95

?
pfam09734: Tau95 (this model, PSSM-Id:370643 is obsolete and has been replaced by 462865)
RNA polymerase III transcription factor (TF)IIIC subunit
TFIIIC1 is a multisubunit DNA binding factor that serves as a dynamic platform for assembly of pre-initiation complexes on class III genes. This entry represents the tau 95 subunit which holds a key position in TFIIIC, exerting both upstream and downstream influence on the TFIIIC-DNA complex by rendering the complex more stable. Once bound to tDNA-intragenic promoter elements, TFIIIC directs the assembly of TFIIIB on the DNA, which in turn recruits the RNA polymerase III (pol III) and activates multiple rounds of transcription.
Statistics
?
PSSM-Id: 370643
Aligned: 68 rows
Threshold Bit Score: 95.0317
Created: 3-May-2019
Updated: 18-Jul-2019
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
EFX04395            202 ILPPPFFTTQTLPFSYF------YSQNPFVREVPthdg---ateLVNSTVg--AALGGYFLKfda--------------- 255 Grosmann...
Q38CE2              283 IFPPGHFIGEKSPFEv---------------------------aLVYDSHs--GKRDMDRLDntatsfncdeaplwefeg 333 Trypanos...
WGS:AAPP:GF14704-PA 158 LSLPELFTHVDVVFSGT------YRLDSVEdgq--------qdvLGVMSKs--TYDNQDVVSfnmv-------------- 207 Drosophi...
EFO94350            166 FLPPYQFSRYLTPSTKIlgretdHTEKTRRAVr----------sGYGQNLr--VERKALSVTvman-------------- 219 Caenorha...
AAI29110            167 YIPPPIFSRLDTPVDYF------YRPETQHREGYhnpsisgenlIGLSRAr--RPHNAIFVNfed--------------- 223 Norway rat
2_pfamImport          1 FLPPASFSRLDCPVDFH------YRPDVLQALSSsns-----nyIVVNRHrslRRHNAVFVSfad--------------- 54 
ANM63682            171 MLLPQFFAPKDIPDNVAl-------------------------kPPATSGp--KKKDDAATQnfyeidvgpv-------- 215 thale cress
XP_003537671        172 IIVPPIFAPKDVPENLVl-------------------------rPATMSSs--KKKPEEVVQphfemdmepv-------- 216 soybean
XP_025884344         71 ILLPSLFASKDMPDNIVl-------------------------kSCTTVGs--KRKQEG--Rhnweremeps-------- 113 tomato
XP_009380747        182 MMVPPLFSLKDRPEKIVl-------------------------nPPANLFs--KNIQRGVMEhkweinierc-------- 226 wild Mal...
EFX04395            256 -------------epvP-AGPPPSLPPLQg-------RRKNAILA-ELRRVVEERPVWTRRGLVNHMSEAMGllfteNRL 313 Grosmann...
Q38CE2              334 vptltmaagdpnipppP-SQAQMDILRRLnegfdeqgCIEVRAVK----ALLEERPVWVTKDLIDAIFETGVcp-rtHIN 407 Trypanos...
WGS:AAPP:GF14704-PA 208 -------------dvfP-TQPDAQSLKRLki-----kYVSDEQFA-SIKKLFDDCPIWTRIALQYE--SGLTn----DKL 261 Drosophi...
EFO94350            220 -------------defP-LEPSTEAVEEAhfr--ckhDEPHRLLK----ELFNERPMWTRIGLLYRTRIDDS------LL 273 Caenorha...
AAI29110            224 -------------tevP-EQPLEAAVQTWkka---ctNPIDQKVEeELRKLFDIRPIWSRNAVKSNVSVHPD------KL 280 Norway rat
2_pfamImport         55 -------------pavP-TECLEAARLNWsrv---cvKDSDKRVEeQIMKMFESRPIWSRNAVKANINIHPD------KL 111
ANM63682            216 ------faidfsvkeiPkKLKWEDFVSRSsn-----hWQWQVAVS----ALFEERPIWTRDSVVQRLLDKGLkc-thHML 279 thale cress
XP_003537671        217 ------laidfdikeiPkKVNWEEYIPQGsd-----qWELQMVVS----RMFDERPIWSKNSLTELLLDKGLsf-shSML 280 soybean
XP_025884344        114 ------laidfaikeiPkPVDWEKYIPQGsd-----rWRWQKAVS----ELFEERKIWAKESLAERLHDRGLkf-rdNML 177 tomato
XP_009380747        227 ------laipfdieriPeKFNWEDHISRDnp-----eWEWQVAVS----KLFDEKPIWPRWSFHERLLDDGQqv-seNQL 290 wild Mal...
EFX04395            314 KTYFAHVCFQFKGGPWRDTLIRYGFDPRKEPDAGRYQTLLFK 355 Grosmannia clavigera kw1407
Q38CE2              408 KKAVACLTYIIKNGPFNRMRIRMGFNPYANPSSACLQRIAVK 449 Trypanosoma brucei
WGS:AAPP:GF14704-PA 262 RCIIPLLAYYFSNGPWRSLYVRFGYDPRRDFHSRFYQTFDFR 303 Drosophila ananassae
EFO94350            274 RSILQKYAFYIQSGPWGRLWCRFGYDPRKDKEGGLYQTLMVs 315 Caenorhabditis remanei
AAI29110            281 KILLPYMAYYMITGPWRSLWIRFGYDPRKHPDAKIYQVLDFR 322 Norway rat
2_pfamImport        112 KLLLPVFAYYMVTGPWRSLWVRMGYDPRKNPDARKYQILDFR 153
ANM63682            280 NRFLLRAAYYFSSGPFLRFWIKRGYDPRNDPESRVYQRMEFR 321 thale cress
XP_003537671        281 RRLLSRISYYFSSGPFLRFWIKKGYDPRKDPNSRIYQRIDYR 322 soybean
XP_025884344        178 KRLLCGVAYYFLNGPFRRFWIKKGYDPRKDPESRIYQ----N 215 tomato
XP_009380747        291 KRLLFRAGYYFSTGPYGRFWVRKGYDPRTDPESRIFQKVDFR 332 wild Malaysian banana
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap