Conserved Protein Domain Family
Pax2_C
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pfam12403: Pax2_C (this model, PSSM-Id:372091 is obsolete and has been replaced by 463563)
Paired-box protein 2 C terminal
This domain family is found in eukaryotes, and is approximately 110 amino acids in length. The family is found in association with pfam00292. This family is the C terminal of the paired-box protein 2 which is a transcription factor involved in embryonic development and organogenesis.
Links
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Statistics
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PSSM-Id: 372091
Aligned: 18 rows
Threshold Bit Score: 93.0077
Created: 1-May-2019
Updated: 18-Jul-2019
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
A0JMA6       346 CSAP-SFS---AFSH-PASVYGQFTSH-MASGRDVVGSTLPGYPPHIP-SGQGNYASSAIAGMVaAGGDYSGNAYSHGAY 418 tropical clawed...
ACM91590     106 aNLA-SP----TPAD-IGSSVPGPQSYpIVTGRDLASTTLPGYPPHVPpAGQGSYSAPTLTGMV-PGSEFSGSPYSHPQY 178 human
3_pfamImport   1 NSLA-NPG---AGAE-LGGSVSGPQSYsLVPGRDLSSTTLPGYPPHVPpTGQGSYSTPSLTGMV-PGRCYASSPAGTQSR 74 
4_pfamImport   1 NSLT-NPG---TAGE-LGSSVSGPQSYsLVPGRDLASTTLPGYPPHVPpTGQGSYSTPSLPGMV-PGGDFSGSPYSHPQY 74 
XP_013919882  76 SSL--STS---ANPD-LGNNVSGPQTYpVVTGRDMASTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGSEFSGNPYSHPQY 148 Thamnophis sirt...
XP_015201452 253 sSLA-NP----TPAD-LGTSVPGAQSYqLVAGRDLASTTLPGYPPHVPpAGQGSYSTPALTGMV-PGSDFSGSPYTHPQY 325 spotted gar
XP_018551314 281 NSLA-NPG---TGAE-LGASVSGPQSYsLVPGRDIASTTLPGYPPHVPpTGQGSYSTPSLTGMV-PGGDFSGSPYSHPQY 354 barramundi perch
XP_028459551 360 SSLSvDAStpsYPAHaHGHCYSQYASQpFIAGRDMASTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGGDFSGNPYSHPQY 438 yellow perch
PIO31986     145 ASTP-TYS---SFTH-HGPPYGQFGSQpLIAGRDMTSTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGSEFSGNPYSHPQY 218 American bullfrog
XP_017573365 269 alnagldevkpslssssssdlgpsvsqnypvGRDMANTTLPGYPPHVPpTGQGSYPTSTLAGMV-PGSEFSGNPYSHPQY 347 red-bellied pir...

A0JMA6       419 AAYGESWRFPSSS----LLGSPYYYSSATRTAPPPTTAGAYD 456 tropical clawed frog
ACM91590     179 SSYNDSWRFPNPG----LLGSPYYYSAAARGAAPPAAATAYD 216 human
3_pfamImport  75 AIYNTPQRWASPSgsadLFQQDY---GSLLGTEIGCSSGLF- 112
4_pfamImport  75 STYNESWRFPNPS----LLVFQQDYG-SLLGTEIGCSSSLF- 110
XP_013919882 149 TTYNEAWRFSNPA----LLSSPYYYSATSRGSAPPTAAAAYD 186 Thamnophis sirtalis
XP_015201452 326 STYNESWRFPNPS----LLVFQQDYG-SRLGSEIGCTSGffp 362 spotted gar
XP_018551314 355 STYNESWRFPNPS----LLGSPYYYSATSRGAGPAATATAsa 392 barramundi perch
XP_028459551 439 TTYNEAWRFSNPA----LLSSPYYYSAASRGSAPPTAATAYD 476 yellow perch
PIO31986     219 TTYNEAWRFSNPA----LLSSPYYYSATSRGSAPPTAATAYD 256 American bullfrog
XP_017573365 348 TTYNEAWRFSNPA----LLSSPYYYS-ASRASAPPAAAAAYD 384 red-bellied piranha
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